RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZNF426Q9BUY5 554 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 DGCR6LQ9BY27 220 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 LAT2Q9GZY6 243 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 RIBC2Q9H4K1 309 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 CDCP1Q9H5V8 836 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 ZNF556Q9HAH1 456 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 TMEM27Q9HBJ8 222 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 GALNT9Q9HCQ5 603 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 FAM118AQ9NWS6 357 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 KLRF1Q9NZS2 232 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 ICAM5Q9UMF0 924 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 MGAT4BQ9UQ53 548 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 YARS2Q9Y2Z4 477 aaKnown RBP6.08□□□□□ -1.44
VPS41-204ENST00000413141 CHCHD2Q9Y6H1 151 aaPredicted RBP6.08□□□□□ -1.44
VPS41-204ENST00000413141 CFAP54Q96N23 3096 aa6.08□□□□□ -1.44
VPS41-204ENST00000413141 B4DXG7 233 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 E9PQ18 207 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 TP53I11O14683 189 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 BCKDKO14874 412 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 KLF4O43474 513 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PIP5K1CO60331 668 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 CLIC3O95833 236 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 GASTP01350 101 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 LINGO3P0C6S8 592 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 POU2F1P14859 743 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PTNP21246 168 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 MYF6P23409 242 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 POLR2IP36954 125 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 IFNGR2P38484 337 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PTGDSP41222 190 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 CASP3P42574 277 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 RBM34P42696 430 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 OMPP47874 163 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 CLK3P49761 638 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 P2RX1P51575 399 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 SUMO3P55854 103 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 COPZ1P61923 177 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 FOXC1Q12948 553 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 NPRL3Q12980 569 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 SRSF6Q13247 344 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 CLN3Q13286 438 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 CBFBQ13951 182 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 KEAP1Q14145 624 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PDK3Q15120 406 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 TBC1D25Q3MII6 688 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ALG10BQ5I7T1 473 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ATP1A1-AS1Q5TC04 95 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 TTC23Q5W5X9 447 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 B3GNTL1Q67FW5 361 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 BICRALQ6AI39 1079 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 WBP2NLQ6ICG8 309 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 JMJD6Q6NYC1 403 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 C1orf94Q6P1W5 598 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 TMEM81Q6P7N7 255 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ULK3Q6PHR2 472 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 KLHL17Q6TDP4 642 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 MBOAT2Q6ZWT7 520 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ZER1Q7Z7L7 766 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 NRMQ8IXM6 262 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 SIRT6Q8N6T7 355 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ZNF555Q8NEP9 628 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PFN4Q8NHR9 129 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PIGXQ8TBF5 258 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 DNAJA4Q8WW22 397 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 TMEM239Q8WW34 195 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 PSMF1Q92530 271 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ZNF524Q96C55 264 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 THOC3Q96J01 351 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 MPP4Q96JB8 637 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 SECISBP2Q96T21 854 aaKnown RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 PITX2Q99697 317 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 GRIP2Q9C0E4 1043 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 METTL7AQ9H8H3 244 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 SH2D2AQ9NP31 389 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 KRCC1Q9NPI7 259 aaPredicted RBP6.07□□□□□ -1.44
VPS41-204ENST00000413141 UBAP1Q9NZ09 502 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 RPS6KB2Q9UBS0 482 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 REV1Q9UBZ9 1251 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 ENOPH1Q9UHY7 261 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 KLK13Q9UKR3 277 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 HRH3Q9Y5N1 445 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 WIF1Q9Y5W5 379 aa6.07□□□□□ -1.44
VPS41-204ENST00000413141 AHCTF1Q8WYP5 2266 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CNOT1A5YKK6 2376 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 A0A087WUJ7 227 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 IGLV3-32A0A0A0MS00 114 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 LOC100130705A0A1B0GUX0 176 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 TRABD2BA6NFA1 517 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ANKUB1A6NFN9 424 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 KPNA4O00629 521 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 SLC16A6O15403 523 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 GMFGO60234 142 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CDC40O60508 579 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS41-204ENST00000413141 SOX14O95416 240 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 TP53P04637 393 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 OSMP13725 252 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 WT1P19544 449 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms