RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 OVCA2Q8WZ82 227 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 TCEAL4Q96EI5 215 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ZBED6CLQ96FA7 236 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 WBP1Q96G27 269 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 NARS2Q96I59 477 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 FCRL1Q96LA6 429 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 NECTIN4Q96NY8 510 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PIP5K1AQ99755 562 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SOSTQ9BQB4 213 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 GSDMCQ9BYG8 508 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SLC29A3Q9BZD2 475 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 MIXL1Q9H2W2 232 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ALG9Q9H6U8 611 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RNF167Q9H6Y7 350 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ISYNA1Q9NPH2 558 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PDGFCQ9NRA1 345 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 GSN-AS1Q9NRJ2 163 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SEMA4GQ9NTN9 838 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 THUMPD1Q9NXG2 353 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 SPHK1Q9NYA1 384 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 EXTL2Q9UBQ6 330 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FEM1BQ9UK73 627 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FZD10Q9ULW2 581 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PADI2Q9Y2J8 665 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 TRAV19A0A0A6YYK7 116 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 C9JVG2 144 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 E2F3O00716 465 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 NUPL2O15504 423 aaKnown RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 PLOD3O60568 738 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 STX11O75558 287 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 AP2A2O94973 939 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 CDRT1O95170 752 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 APOC3P02656 99 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FBP1P09467 338 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 IQCF3P0C7M6 154 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SULT1A3P0DMM9 295 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SULT1A4P0DMN0 295 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 HKR1P10072 659 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 NR2F6P10588 404 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 PRF1P14222 555 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 ARSAP15289 507 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 GOT1P17174 413 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 RAB3BP20337 219 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 MAPK3P27361 379 aaPredicted RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 CSKP41240 450 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 HNMTP50135 292 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 MAZP56270 477 aaKnown RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 RAB5BP61020 215 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 GPR17Q13304 367 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 IL18Q14116 193 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SPHARQ15513 63 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SSX1Q16384 188 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 UGCGQ16739 394 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 EIF2S3LQ2VIR3 472 aaKnown RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 HFEQ30201 348 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 LGALSLQ3ZCW2 172 aaPredicted RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 PLAC9Q5JTB6 97 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 CELF3Q5SZQ8 465 aaKnown RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 AVPI1Q5T686 147 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 HECTD2Q5U5R9 776 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FNDC7Q5VTL7 733 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A2PQ658T7 463 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 OR7E24Q6IFN5 339 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 TRNP1Q6NT89 227 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 C3orf33Q6P1S2 294 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FUT10Q6P4F1 479 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 WASH2PQ6VEQ5 465 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 GCNT7Q6ZNI0 430 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 C17orf107Q6ZR85 190 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 RNF165Q6ZSG1 346 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SVBPQ8N300 66 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FBXO39Q8N4B4 442 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 FTMTQ8N4E7 242 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SLC44A3Q8N4M1 653 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 PROKR2Q8NFJ6 384 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 STAG3L4Q8TBR4 150 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SLC5A11Q8WWX8 675 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 KAT2AQ92830 837 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 C3orf49Q96BT1 292 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 ZNF419Q96HQ0 510 aaPredicted RBP5.06□□□□□ -1.6
CLK1-202ENST00000409403 TSGA13Q96PP4 275 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 PRR25Q96S07 402 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 PAAF1Q9BRP4 392 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 RHNO1Q9BSD3 238 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 NLNQ9BYT8 704 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 HDHD2Q9H0R4 259 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 TUBB1Q9H4B7 451 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 PPP1R3EQ9H7J1 279 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 GPR83Q9NYM4 423 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 NDUFAF4Q9P032 175 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 SEC14L3Q9UDX4 400 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 MALT1Q9UDY8 824 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 CBY1Q9Y3M2 126 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 NPTNQ9Y639 398 aa5.06□□□□□ -1.6
CLK1-202ENST00000409403 A0A1B0GTQ1 180 aa5.05□□□□□ -1.6
CLK1-202ENST00000409403 C17orf113A0A1B0GUU1 675 aa5.05□□□□□ -1.6
CLK1-202ENST00000409403 LOC390937A0A1W2PQ73 354 aa5.05□□□□□ -1.6
CLK1-202ENST00000409403 GXYLT2A0PJZ3 443 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms