RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 THY1P04216 161 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 IFNA8P32881 189 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 IDH2P48735 452 aaKnown RBP18.65■□□□□ 0.58
CHKB-201ENST00000406938 SUMO3P55854 103 aaPredicted RBP18.65■□□□□ 0.58
CHKB-201ENST00000406938 COPZ1P61923 177 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 CBFBQ13951 182 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 LAPTM4AQ15012 233 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 LRRC36Q1X8D7 754 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 FGD3Q5JSP0 725 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 GDF7Q7Z4P5 450 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 WDSUB1Q8N9V3 476 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 MDS2Q8NDY4 140 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 OR4C15Q8NGM1 316 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 HAS2Q92819 552 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 ZNF524Q96C55 264 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 SLC7A7Q9UM01 511 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 URB1O60287 2271 aaKnown RBP18.65■□□□□ 0.58
CHKB-201ENST00000406938 A0A0B4J2E0 115 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 A0A1B0GWA3 101 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 A0A1B0GX12 115 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 A0A1W2PRQ8 180 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 ANKUB1A6NFN9 424 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 FAAHO00519 579 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 SNX4O95219 450 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 PGCP20142 388 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 FPR1P21462 350 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 MST1P26927 711 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 DNAJA1P31689 397 aaKnown RBP18.64■□□□□ 0.57
CHKB-201ENST00000406938 LIMS1P48059 325 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 PTDSS1P48651 473 aaKnown RBP18.64■□□□□ 0.57
CHKB-201ENST00000406938 MASP1P48740 699 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 DNASE1L1P49184 302 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 GPR85P60893 370 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 ST3GAL3Q11203 375 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 DGCR6Q14129 220 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 TOMM34Q15785 309 aaPredicted RBP18.64■□□□□ 0.57
CHKB-201ENST00000406938 EXOC3L2Q2M3D2 409 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 ZNF613Q6PF04 617 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 IGFL2Q6UWQ7 119 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 PACS2Q86VP3 889 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 HS3ST5Q8IZT8 346 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 ZNF563Q8TA94 476 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 EME1Q96AY2 570 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 HES7Q9BYE0 225 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 HHATLQ9HCP6 504 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 DEPPQ9NTK1 212 aa18.64■□□□□ 0.57
CHKB-201ENST00000406938 TRBV4-1A0A0J9YWV2 114 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 GNB5O14775 395 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 SNPHO15079 494 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 ELAVL4P26378 380 aaKnown RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 MSX1P28360 303 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 SMIM11AP58511 58 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 KCNAB2Q13303 367 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 OGFRL1Q5TC84 451 aaPredicted RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 BORAQ6PGQ7 559 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 SHQ1Q6PI26 577 aaKnown RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 LSRQ86X29 649 aaPredicted RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 OR2M3Q8NG83 312 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 OR5K1Q8NHB7 308 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 GPR119Q8TDV5 335 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 TMEM41AQ96HV5 264 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 JSRP1Q96MG2 331 aaPredicted RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 SMAD5Q99717 465 aaKnown RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 BARD1Q99728 777 aaKnown RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 DSN1Q9H410 356 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 RPS6KB2Q9UBS0 482 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 FBXL2Q9UKC9 423 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 MAGED1Q9Y5V3 778 aaPredicted RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 PDLIM1O00151 329 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 CDC40O60508 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHKB-201ENST00000406938 TRIM3O75382 744 aaPredicted RBP18.63■□□□□ 0.57
CHKB-201ENST00000406938 LYPD3O95274 346 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 THRBP10828 461 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 HMGA2P52926 109 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 TRAM2Q15035 370 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 QPRTQ15274 297 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 WBP2NLQ6ICG8 309 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 PLCZ1Q86YW0 608 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 ZDHHC13Q8IUH4 622 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 SVOPLQ8N434 492 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 FADS6Q8N9I5 356 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 OR4K17Q8NGC6 315 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 SLC7A13Q8TCU3 470 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 ZNF597Q96LX8 424 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 ALPK1Q96QP1 1244 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHKB-201ENST00000406938 CSAG2Q9Y5P2 127 aa18.63■□□□□ 0.57
CHKB-201ENST00000406938 G3V2T6 193 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 CHP2O43745 196 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 NTN1O95631 604 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 CNR1P21554 472 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 GK3PQ14409 553 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 ALG10BQ5I7T1 473 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 ULK3Q6PHR2 472 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 ARSKQ6UWY0 536 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 NKAIN4Q8IVV8 208 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 OR1J4Q8NGS1 313 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 RNF217Q8TC41 542 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 C3orf49Q96BT1 292 aa18.62■□□□□ 0.57
CHKB-201ENST00000406938 SDCCAG3Q96C92 435 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 342.1 ms