RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SDSLQ96GA7 329 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 DHTKD1Q96HY7 919 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 PRICKLE1Q96MT3 831 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 AGAP3Q96P47 875 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 CASD1Q96PB1 797 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR4F4Q96R69 305 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 PLIN2Q99541 437 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 OMDQ99983 421 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 COMMD4Q9H0A8 199 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 GORASP2Q9H8Y8 452 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 TXLNGQ9NUQ3 528 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 NUDT4Q9NZJ9 180 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 SENP1Q9P0U3 644 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 NYAP2Q9P242 653 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 CYTH4Q9UIA0 394 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 MRPS33Q9Y291 106 aaKnown RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 RRP15Q9Y3B9 282 aaKnown RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 WDR45Q9Y484 360 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 KLF2Q9Y5W3 355 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 LY75O60449 1722 aa3.9□□□□□ -1.78
HMGB3P18-201ENST00000406327 TCHHQ07283 1943 aa3.9□□□□□ -1.78
HMGB3P18-201ENST00000406327 WDR81Q562E7 1941 aa3.9□□□□□ -1.78
HMGB3P18-201ENST00000406327 PVALEFA0A1B0GWK0 134 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 A0A1W2PNV4 684 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 RAMP1O60894 148 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF821O75541 412 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 STX11O75558 287 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGKV3-20P01619 116 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 MT-ND1P03886 318 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 IQCF3P0C7M6 154 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCNE1P24864 410 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 LMO2P25791 158 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 OXTRP30559 389 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CASP14P31944 242 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 PPP1R2P41236 205 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 MFAP2P55001 183 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 NDUFV3P56181 108 aaKnown RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 NTHL1P78549 312 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 BDH1Q02338 343 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF85Q03923 595 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 NCBP1Q09161 790 aaKnown RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 TCP10Q12799 353 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 SELPLGQ14242 412 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 RAB35Q15286 201 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 ACER2Q5QJU3 275 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 RABGAP1LQ5R372 815 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 TTC23Q5W5X9 447 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 SEL1L3Q68CR1 1132 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 HACD2Q6Y1H2 254 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 LRRC49Q8IUZ0 686 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC71Q8IV32 467 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 PHC2Q8IXK0 858 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 SYT14Q8NB59 555 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 Q8NBF4 154 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 ADIPOR1Q96A54 375 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 WBP1Q96G27 269 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 GLT8D2Q9H1C3 349 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC25A51Q9H1U9 297 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 TUBB1Q9H4B7 451 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 PSTPIP2Q9H939 334 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CALHM2Q9HA72 323 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 AMBNQ9NP70 447 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 SMPD3Q9NY59 655 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 CRLS1Q9UJA2 301 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF346Q9UL40 294 aaKnown RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 HPCAL4Q9UM19 191 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 RABL2BQ9UNT1 228 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 MRPL11Q9Y3B7 192 aaKnown RBP3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 MAD1L1Q9Y6D9 718 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 PHLPP2Q6ZVD8 1323 aa3.9□□□□□ -1.79
HMGB3P18-201ENST00000406327 MYH7P12883 1935 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 C10orf71Q711Q0 1435 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 MEX3AA1L020 520 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 PCP4L1A6NKN8 68 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 FOXI3A8MTJ6 420 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 A8MXK9 166 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 F5H6K3 240 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CASKO14936 926 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TM9SF1O15321 606 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 DCXO43602 365 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 NUDT21O43809 227 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 DUX1O43812 170 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC37A4O43826 429 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TYROBPO43914 113 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TDP2O95551 362 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 POP4O95707 220 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 OPN1LWP04000 364 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 GYPCP04921 128 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TPM1P09493 284 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 GCFC2P16383 781 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF10P21506 573 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CASQ1P31415 396 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CA8P35219 290 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCT6AP40227 531 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 RGS4P49798 205 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 GNG11P61952 73 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 KLRC3Q07444 240 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms