RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 VRK2Q86Y07 508 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 BCORP1Q8N888 145 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 KBTBD8Q8NFY9 601 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 OR52P1PQ8NH57 321 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF354BQ96LW1 612 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 G6PC3Q9BUM1 346 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 WWTR1Q9GZV5 400 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 NXF2Q9GZY0 626 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 TRIM45Q9H8W5 580 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 IMPAD1Q9NX62 359 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF226Q9NYT6 803 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 CCDC59Q9P031 241 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF223Q9UK11 482 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 UGT2A1Q9Y4X1 527 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 HS3ST3B1Q9Y662 390 aa17.81■□□□□ 0.44
PDLIM2-204ENST00000397760 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 PRAMEF25A6NGN4 478 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 KIAA0513O60268 411 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 GADD45GO95257 159 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 IFNW1P05000 195 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 LIPAP38571 399 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 STAT5AP42229 794 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 LSM3P62310 102 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 PCOLCEQ15113 449 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 FLYWCH1Q4VC44 716 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 HSDL2Q6YN16 418 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 BTLAQ7Z6A9 289 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 ZAR1Q86SH2 424 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 CCDC103Q8IW40 242 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 PEX5LQ8IYB4 626 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 MCFD2Q8NI22 146 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 PMM1Q92871 262 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 NIPSNAP1Q9BPW8 284 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 CDCA4Q9BXL8 241 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 PINK1Q9BXM7 581 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 NRSN2Q9GZP1 204 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 CACYBPQ9HB71 228 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 IFT52Q9Y366 437 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 FAM186AA6NE01 2351 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 WDFY3Q8IZQ1 3526 aa17.8■□□□□ 0.44
PDLIM2-204ENST00000397760 DMXL1Q9Y485 3027 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 GUSBP08236 651 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 RNF4P78317 190 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 DNASE1L3Q13609 305 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 PUM1Q14671 1186 aaKnown RBP eCLIP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF367Q7RTV3 350 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 STX19Q8N4C7 294 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF700Q9H0M5 742 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF232Q9UNY5 417 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 CCDC88CQ9P219 2028 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 IGHV1-45A0A0A0MS14 117 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 NPIPA5A0A0B4J1W7 369 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 METTL15A6NJ78 407 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 ZAR1LA6NP61 321 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 C21orf140B9A014 251 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 NPIPA7E9PJI5 369 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 BOLA2-SMG1P6H3BVE0 249 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 NPIPA8P0DM63 369 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 PIPP12273 146 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 DLSTP36957 453 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 NR0B1P51843 470 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 RPS3AP61247 264 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 SSPNQ14714 243 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 DECR1Q16698 335 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 RSPO4Q2I0M5 234 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 AGAP7PQ5VUJ5 663 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 PLEKHG7Q6ZR37 379 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 LMF1Q96S06 567 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 GPR87Q9BY21 358 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 RLIMQ9NVW2 624 aa17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF443Q9Y2A4 671 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-204ENST00000397760 TRBV11-1A0A0K0K1C0 115 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 CENPVL1A0A0U1RR11 272 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 CDC14CA4D256 554 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 CDRT15L2A8MXV6 281 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 PEX12O00623 359 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 SOCS6O14544 535 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 OXSR1O95747 527 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 ADAP00813 363 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 DBIP07108 87 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 COX6A1P12074 109 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 RPS4Y1P22090 263 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 C21orf33P30042 268 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 PRKAR1BP31321 381 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 IDH2P48735 452 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 LARS2Q15031 903 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 MAPK14Q16539 360 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 TIMM50Q3ZCQ8 353 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 COLEC12Q5KU26 742 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 TMEM236Q5W0B7 351 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 KIRREL2Q6UWL6 708 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 COMTD1Q86VU5 262 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 ZNF441Q8N8Z8 693 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 C17orf47Q8NEP4 570 aa17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 APOBEC4Q8WW27 367 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 RPL3LQ92901 407 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-204ENST00000397760 RACGAP1Q9H0H5 632 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms