RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 UTP23Q9BRU9 249 aaKnown RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 TRIM2Q9C040 744 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 CNOT11Q9UKZ1 510 aaKnown RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 CACNA1AO00555 2505 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 FMO6PO60774 539 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 RASAL1O95294 804 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 TCEA1P23193 301 aaKnown RBP19.32■□□□□ 0.68
CPNE1-204ENST00000397443 P2RX1P51575 399 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 SMIM11AP58511 58 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 TUBA3CQ13748 450 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 TRAM2Q15035 370 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 CRTC2Q53ET0 693 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-204ENST00000397443 TUBA3EQ6PEY2 450 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF227Q86WZ6 799 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 MISPQ8IVT2 679 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 FDCSPQ8NFU4 85 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 TMEM255BQ8WV15 326 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 RNF138Q8WVD3 245 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 SLC35B4Q969S0 331 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 SGCZQ96LD1 299 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 DHRS1Q96LJ7 313 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 VCXQ9H320 206 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 EVA1AQ9H8M9 152 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 KIF17Q9P2E2 1029 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 CPAMD8Q8IZJ3 1885 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 MGAQ8IWI9 3026 aa19.32■□□□□ 0.68
CPNE1-204ENST00000397443 A0A1W2PRQ8 180 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 CCNB2O95067 398 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 P04436 131 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 CAPNS1P04632 268 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 POU2F1P14859 743 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ENDOUP21128 410 aaKnown RBP19.31■□□□□ 0.68
CPNE1-204ENST00000397443 LIMS1P48059 325 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 GPR85P60893 370 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 DGCR6Q14129 220 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 MICAQ29983 383 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ALG10BQ5I7T1 473 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 POMZP3Q6PJE2 187 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ISLR2Q6UXK2 745 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 MEX3DQ86XN8 651 aaKnown RBP19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ATG16L2Q8NAA4 619 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 PSD4Q8NDX1 1056 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 TOR1AIP2Q8NFQ8 470 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 OR10G2Q8NGC3 310 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 OR5W2Q8NH69 310 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 SIGLEC12Q96PQ1 595 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 SH2D2AQ9NP31 389 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 SDHAF3Q9NRP4 125 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 KCNMB2Q9Y691 235 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ANKRD11Q6UB99 2663 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-204ENST00000397443 A0A0B4J2E0 115 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 A0A0G2JMM0 328 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 A0A1B0GX12 115 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 A0A1W2PPB8 328 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 A0A1W2PRS3 328 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 KIR3DP1A8MWS1 328 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 OR10H3O60404 316 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 UQCRBP14927 111 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 MASP1P48740 699 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 HMGA2P52926 109 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 CBFBQ13951 182 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 PPP4R4Q6NUP7 873 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 WDR88Q6ZMY6 472 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 P3H2Q8IVL5 708 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 GATA6Q92908 595 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 DSN1Q9H410 356 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF552Q9H707 407 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-204ENST00000397443 CPNE5Q9HCH3 593 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 SELENONQ9NZV5 590 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 RAXQ9Y2V3 346 aa19.31■□□□□ 0.68
CPNE1-204ENST00000397443 KPNA4O00629 521 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-204ENST00000397443 RRP8O43159 456 aaKnown RBP19.3■□□□□ 0.68
CPNE1-204ENST00000397443 PEX1O43933 1283 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 SLC6A8P48029 635 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 DNASE1L1P49184 302 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 DAG1Q14118 895 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 OR1C1Q15619 314 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF613Q6PF04 617 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF730Q6ZMV8 503 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 GALNT5Q7Z7M9 940 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 APLFQ8IW19 511 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-204ENST00000397443 LSMEM1Q8N8F7 131 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 NR4A3Q92570 626 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 SLC38A4Q969I6 547 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 SECISBP2Q96T21 854 aaKnown RBP19.3■□□□□ 0.68
CPNE1-204ENST00000397443 FEVQ99581 238 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 PROK2Q9HC23 129 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 SACM1LQ9NTJ5 587 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 CNIH4Q9P003 139 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 FBXL2Q9UKC9 423 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 VDAC3Q9Y277 283 aa19.3■□□□□ 0.68
CPNE1-204ENST00000397443 A0A087WUU8 490 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 PGCP20142 388 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 MST1P26927 711 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 SNTA1Q13424 505 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 WBP2NLQ6ICG8 309 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 SLC30A6Q6NXT4 461 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 OR4K5Q8NGD3 323 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 GTPBP3Q969Y2 492 aaKnown RBP19.29■□□□□ 0.68
CPNE1-204ENST00000397443 RELTQ969Z4 430 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms