RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DUSP5Q16690 384 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 FBXW9Q5XUX1 488 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 NUP43Q8NFH3 380 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 PHOSPHO1Q8TCT1 267 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 C3orf49Q96BT1 292 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 MRGPRX4Q96LA9 322 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 TMEM237Q96Q45 408 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 IQCGQ9H095 443 aaKnown RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 NTMQ9P121 344 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 ICAM5Q9UMF0 924 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 POLR3HQ9Y535 204 aaPredicted RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 M0R1B8 84 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 PDPK1O15530 556 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 ALOX5P09917 674 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 PRKCAP17252 672 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 TAC1P20366 129 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 SERPINB9P50453 376 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 CHRNEQ04844 493 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 TOMM34Q15785 309 aaPredicted RBP13.14□□□□□ -0.31
SEC13-206ENST00000397102 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 CCNJQ5T5M9 372 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 CBLN3Q6UW01 205 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
SEC13-206ENST00000397102 COX18Q8N8Q8 333 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 ZFP28Q8NHY6 868 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 KCNA7Q96RP8 456 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 TRMOQ9BU70 441 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 FKRPQ9H9S5 495 aa13.14□□□□□ -0.31
SEC13-206ENST00000397102 MYOZ1Q9NP98 299 aaPredicted RBP13.14□□□□□ -0.31
SEC13-206ENST00000397102 LOC390937A0A1W2PQ73 354 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 A0A1W2PR80 420 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 CCT8L1PA6NM43 557 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 OIP5O43482 229 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 ZNF23P17027 643 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 IMPDH1P20839 514 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 PHC1P78364 1004 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 C2orf54Q08AI8 447 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 LCP2Q13094 533 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 IMPG1Q17R60 797 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 IQCCQ4KMZ1 466 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 SLC25A53Q5H9E4 307 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
SEC13-206ENST00000397102 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 SZRD1Q7Z422 152 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 ZNF527Q8NB42 609 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 GPR119Q8TDV5 335 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 ZNF764Q96H86 408 aaPredicted RBP13.13□□□□□ -0.31
SEC13-206ENST00000397102 SORCS2Q96PQ0 1159 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 TAS2R16Q9NYV7 291 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 CARD8Q9Y2G2 431 aa13.13□□□□□ -0.31
SEC13-206ENST00000397102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEC13-206ENST00000397102 H3BNH8 94 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 IGHV3-9P01782 118 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 POU6F2P78424 691 aaPredicted RBP13.12□□□□□ -0.31
SEC13-206ENST00000397102 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 OR7E24Q6IFN5 339 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 NOXRED1Q6NXP6 359 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 C3orf33Q6P1S2 294 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
SEC13-206ENST00000397102 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
SEC13-206ENST00000397102 OTUB1Q96FW1 271 aaPredicted RBP13.12□□□□□ -0.31
SEC13-206ENST00000397102 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 MUS81Q96NY9 551 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 FOXN4Q96NZ1 517 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 OR5B2Q96R09 309 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 PAFAH2Q99487 392 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 SOX7Q9BT81 388 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 NINJ2Q9NZG7 142 aa13.12□□□□□ -0.31
SEC13-206ENST00000397102 IGKV3D-15A0A087WSY6 115 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 TRIM49D1C9J1S8 452 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 ETV2O00321 342 aaPredicted RBP13.11□□□□□ -0.31
SEC13-206ENST00000397102 KCNAB3O43448 404 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 RSL1D1O76021 490 aaKnown RBP13.11□□□□□ -0.31
SEC13-206ENST00000397102 H6PDO95479 791 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 SRP14P37108 136 aaKnown RBP13.11□□□□□ -0.31
SEC13-206ENST00000397102 FRKP42685 505 aaPredicted RBP13.11□□□□□ -0.31
SEC13-206ENST00000397102 FOXA1P55317 472 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 PDK3Q15120 406 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 GABRA6Q16445 453 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 CARTPTQ16568 116 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 ABLIM2Q6H8Q1 611 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 JADE3Q92613 823 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 ARL8AQ96BM9 186 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms