RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IDSB3KWA1 339 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 FMO6PO60774 539 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
CLIP2-203ENST00000395060 C8AP07357 584 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 BMP7P18075 431 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 SNRPNP63162 240 aaKnown RBP13.3□□□□□ -0.28
CLIP2-203ENST00000395060 GXYLT1Q4G148 440 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 KIAA1211LQ6NV74 962 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 C17orf107Q6ZR85 190 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 TCEAL8Q8IYN2 117 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 ADAMTS15Q8TE58 950 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 IRF7Q92985 503 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 RELTQ969Z4 430 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 WDR34Q96EX3 536 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 ERVMER34-1Q9H9K5 563 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 KLHL28Q9NXS3 571 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
CLIP2-203ENST00000395060 FXYD6-FXYD2A0A087WZ82 144 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 A0A0G2JK05 382 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 LRRN3E7EW58 273 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 LILRB5O75023 590 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 CXCL2P19875 107 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 CRMP1Q14194 572 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 TEAD2Q15562 447 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ODF4Q2M2E3 257 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 NIPAL3Q6P499 406 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ZNF613Q6PF04 617 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ACOT11Q8WXI4 607 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 DTD2Q96FN9 168 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 GINS4Q9BRT9 223 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 FXYD6Q9H0Q3 95 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 RHBGQ9H310 441 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 LRRN3Q9H3W5 708 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ISYNA1Q9NPH2 558 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 IL20Q9NYY1 176 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 FBXL2Q9UKC9 423 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ZMIZ1Q9ULJ6 1067 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 MEIKINA0A087WXM9 373 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 MEIS3P1A6NDR6 274 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 OR52A4PA6NMU1 304 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 IMPA2O14732 288 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 CXCL14O95715 111 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 OLFM2O95897 454 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 IGHA1P01876 353 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 HOXD4P09016 255 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 DRD2P14416 443 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 GLULP15104 373 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ACADLP28330 430 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 NUP62P37198 522 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 MAZP56270 477 aaKnown RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 KRT33BQ14525 404 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 SLC9A5Q14940 896 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 TCEAL5Q5H9L2 206 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 APOOLQ6UXV4 268 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 MEIOBQ8N635 442 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ADAMTS14Q8WXS8 1223 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 PTP4A1Q93096 173 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 PINK1Q9BXM7 581 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 WDR26Q9H7D7 661 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-203ENST00000395060 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ASB4Q9Y574 426 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 ARID1AO14497 2285 aa13.29□□□□□ -0.28
CLIP2-203ENST00000395060 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 AIFM1O95831 613 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 MT-ND5P03915 603 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 F8A1P23610 371 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 MPP7Q5T2T1 576 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 CNKSR3Q6P9H4 555 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 MEPCEQ7L2J0 689 aaKnown RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 TMEFF1Q8IYR6 380 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 OR52L1Q8NGH7 329 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 OTUB2Q96DC9 234 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 C19orf43Q9BQ61 176 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 TMEM168Q9H0V1 697 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FBXO9Q9UK97 447 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 KCNK6Q9Y257 313 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 OR1A2Q9Y585 309 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 KIF26AQ9ULI4 1882 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 ATG2BQ96BY7 2078 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 G3V3Q6 166 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FGF18O76093 207 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 APOC3P02656 99 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SULT1A3P0DMM9 295 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 SULT1A4P0DMN0 295 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 ATP5A1P25705 553 aaKnown RBP13.28□□□□□ -0.28
CLIP2-203ENST00000395060 RIN1Q13671 783 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 FAM111BQ6SJ93 734 aa13.28□□□□□ -0.28
CLIP2-203ENST00000395060 C3P1Q6ZMU1 363 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms