RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 IFNGP01579 166 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 LIMS3P0CW19 117 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 LIMS4P0CW20 117 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ETV6P41212 452 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 P2RY2P41231 377 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 AGERQ15109 404 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 NDUFA9Q16795 377 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 NKPD1Q17RQ9 610 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 GFOD2Q3B7J2 385 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 HSD17B12Q53GQ0 312 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 TANGO2Q6ICL3 276 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 CPA6Q8N4T0 437 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 OR4C15Q8NGM1 316 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 CPNE2Q96FN4 548 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 MED30Q96HR3 178 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 TMEM43Q9BTV4 400 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 WDR26Q9H7D7 661 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 TMEM185BQ9H7F4 350 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 MBNL1Q9NR56 388 aaKnown RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 SPACA6W5XKT8 324 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 A0A0B4J293 547 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 UNC119BA6NIH7 251 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 H7C1C5 153 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 PVRP15151 417 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF3P17036 446 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 TEAD1P28347 426 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 PDX1P52945 283 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 EPHA5P54756 1037 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 LCN6P62502 163 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 KCNAB1Q14722 419 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 YIF1BQ5BJH7 314 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 LRRN1Q6UXK5 716 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 FAM220AQ7Z4H9 259 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 SLITRK4Q8IW52 837 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 HOMEZQ8IX15 550 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ZDHHC5Q9C0B5 715 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 EXO5Q9H790 373 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 NAT1P18440 290 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 EIF1AXP47813 144 aaKnown RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 CHCHD4Q8N4Q1 142 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 OR4D9Q8NGE8 314 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 DERL3Q96Q80 235 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-202ENST00000394820 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 NUP50Q9UKX7 468 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 MKL2Q9ULH7 1088 aa12.31□□□□□ -0.44
NFKB1-202ENST00000394820 CDHR4A6H8M9 788 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 NPC1O15118 1278 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 RNF13O43567 381 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 UGDHO60701 494 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SLC19A2O60779 497 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GDI1P31150 447 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SKP1P63208 163 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 RGS1Q08116 209 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GAS6Q14393 721 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 PON3Q15166 354 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 PDGFRLQ15198 375 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 KIAA1324Q6UXG2 1013 aaKnown RBP12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SIRT6Q8N6T7 355 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 ANKRD53Q8N9V6 530 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 ACOT12Q8WYK0 555 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 SEC22AQ96IW7 307 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.3□□□□□ -0.44
NFKB1-202ENST00000394820 TMEM38AQ9H6F2 299 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 MLXQ9UH92 298 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 KNTC1P50748 2209 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 TRIM64BA6NI03 449 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 PLGP00747 810 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-202ENST00000394820 ITGA3P26006 1051 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 GDNFP39905 211 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 TCTE1Q5JU00 501 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 ARSKQ6UWY0 536 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 RNF32Q9H0A6 362 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 UBQLN3Q9H347 655 aa12.3□□□□□ -0.44
NFKB1-202ENST00000394820 OR2S2Q9NQN1 319 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms