RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 OR4F15Q8NGB8 312 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 GATAD2BQ8WXI9 593 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 TM9SF4Q92544 642 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 COX4I2Q96KJ9 171 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 ASPNQ9BXN1 380 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 SIAEQ9HAT2 523 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 SSR3Q9UNL2 185 aa17.59■□□□□ 0.41
ERCC2-203ENST00000391944 SPIN1Q9Y657 262 aaPredicted RBP17.59■□□□□ 0.41
ERCC2-203ENST00000391944 ARID1BQ8NFD5 2236 aaPredicted RBP17.59■□□□□ 0.41
ERCC2-203ENST00000391944 IGKV3D-11A0A0A0MRZ8 115 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 FAM183AA6NL82 134 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 SOCS6O14544 535 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 IGHA1P01876 353 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 MSL3P1P0C860 447 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 MYF5P13349 255 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 PPP5CP53041 499 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 SHBQ15464 509 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 KLHL26Q53HC5 615 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 TUBA3EQ6PEY2 450 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 WDR74Q6RFH5 385 aaPredicted RBP17.58■□□□□ 0.41
ERCC2-203ENST00000391944 KIRREL2Q6UWL6 708 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 LAPTM4BQ86VI4 370 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 TMEM151BQ8IW70 566 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 UBALD2Q8IYN6 164 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 GPR135Q8IZ08 494 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 TRMT61AQ96FX7 289 aaKnown RBP17.58■□□□□ 0.41
ERCC2-203ENST00000391944 SLC46A1Q96NT5 459 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 ELF4Q99607 663 aaPredicted RBP17.58■□□□□ 0.41
ERCC2-203ENST00000391944 NDC1Q9BTX1 674 aa17.58■□□□□ 0.41
ERCC2-203ENST00000391944 TAF4O00268 1085 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 PFDN1O60925 122 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 NGFRP08138 427 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 TSPAN19P0C672 248 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 CD40LGP29965 261 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 PPICP45877 212 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 SLC35F1Q5T1Q4 408 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 PRAMEF17Q5VTA0 474 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 PLBD1Q6P4A8 553 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 PRSS42Q7Z5A4 293 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 LHFPL3Q86UP9 236 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 KMT5CQ86Y97 462 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 CADM2Q8N3J6 435 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 ARHGAP9Q9BRR9 750 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 ZNF649Q9BS31 505 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 IFT27Q9BW83 186 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 CMC2Q9NRP2 79 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 RPS6KB2Q9UBS0 482 aa17.58■□□□□ 0.4
ERCC2-203ENST00000391944 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 A8MU76 341 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 ZNF670-ZNF695F2Z2N8 137 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 POLR1CO15160 346 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-203ENST00000391944 ARRB1P49407 418 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-203ENST00000391944 FOXK2Q01167 660 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 IFITM3Q01628 133 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 OAFQ86UD1 273 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 ZNF321PQ8N8H1 164 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 PSD4Q8NDX1 1056 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 OR51A7Q8NH64 312 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 TSLPQ969D9 159 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 JAM3Q9BX67 310 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 TBCCD1Q9NVR7 557 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 SERTAD3Q9UJW9 196 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 SLC35A3Q9Y2D2 325 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 PEX16Q9Y5Y5 336 aa17.57■□□□□ 0.4
ERCC2-203ENST00000391944 TRAV27A0A087WT01 109 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 DYRK3O43781 588 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 S100A5P33763 92 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 RPS19P39019 145 aaKnown RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 NDUFAF6Q330K2 333 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 PLK5Q496M5 336 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 NIPAL3Q6P499 406 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 RTL4Q6ZR62 310 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 MEPCEQ7L2J0 689 aaKnown RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 C7orf57Q8NEG2 295 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 OIT3Q8WWZ8 545 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ABTB1Q969K4 478 aaPredicted RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 OTULINQ96BN8 352 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 CLIP3Q96DZ5 547 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 LMF1Q96S06 567 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 HOXD1Q9GZZ0 328 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ZNF304Q9HCX3 659 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ETAA1Q9NY74 926 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 CLCA3PQ9Y6N3 262 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 A8MUA0 341 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 J3QRE1 110 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 RORAP35398 523 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ATP6V1E1P36543 226 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ADH7P40394 386 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 GPR143P51810 404 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ATP1A4Q13733 1029 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 PRPF38BQ5VTL8 546 aaKnown RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 SLC43A2Q8N370 569 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 EFHD2Q96C19 240 aaPredicted RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 TNFRSF13CQ96RJ3 184 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 UBQLN4Q9NRR5 601 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 ERVK13-1Q9NX77 482 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 TNFRSF10DQ9UBN6 386 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 BAIAP2Q9UQB8 552 aa17.56■□□□□ 0.4
ERCC2-203ENST00000391944 SF3B6Q9Y3B4 125 aaKnown RBP17.56■□□□□ 0.4
ERCC2-203ENST00000391944 RP1P56715 2156 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms