RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 CCSO14618 274 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 AIM2O14862 343 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RAB29O14966 203 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ARPC1BO15143 372 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 EPHB6O15197 1021 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SIGLEC5O15389 551 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RGS16O15492 202 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PPIHO43447 177 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RGS14O43566 566 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 KDELR3O43731 214 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GMDSO60547 372 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HUS1O60921 280 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 N4BP1O75113 896 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RFPL2O75678 378 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SOX30O94993 753 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 DIRAS1O95057 198 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TSPAN13O95857 204 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TSPAN15O95858 294 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SNAI1O95863 264 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 MMP1P03956 469 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PLEKP08567 350 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HBQ1P09105 142 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HOXC6P09630 235 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 FAM157CP0CG43 387 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 NPIPA8P0DM63 369 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 IGHV4-31P0DP07 118 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HLA-DOBP13765 273 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 JUNBP17275 347 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PGCP20142 388 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 AADACP22760 399 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 STOMP27105 288 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PSMB6P28072 239 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HMOX2P30519 316 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HOXD3P31249 432 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 OTX1P32242 354 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 CFHR2P36980 270 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPL13AP40429 203 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ETV5P41161 510 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 NBL1P41271 181 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 CRYBB2P43320 205 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GPR1P46091 355 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GNPDA1P46926 289 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PGFP49763 221 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ART1P52961 327 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ACLYP53396 1101 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ATP12AP54707 1039 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PSMD4P55036 377 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 MLLT10P55197 1068 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMEM50BP56557 158 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 STX17P56962 302 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RIPK4P57078 832 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 YWHAGP61981 247 aaKnown RBP eCLIP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPS13P62277 151 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 UBE2IP63279 158 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PHEXP78562 749 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 CDKL1Q00532 357 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PAX5Q02548 391 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 RIGQ13278 110 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SLAMF1Q13291 335 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ITGB3BPQ13352 177 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 MFAP5Q13361 173 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PMS2P3Q13401 168 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ART3Q13508 389 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GRB14Q14449 540 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ATXN7L3Q14CW9 347 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 DAZAP2Q15038 168 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PON2Q15165 354 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TAF13Q15543 124 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 USF2Q15853 346 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF77Q15935 545 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SLC15A2Q16348 729 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ISXQ2M1V0 245 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SGSM1Q2NKQ1 1148 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SNAI3Q3KNW1 292 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 SLC25A52Q3SY17 297 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF260Q3ZCT1 412 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ASPRV1Q53RT3 343 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 MTX3Q5HYI7 312 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 OTUD1Q5VV17 481 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 IRAK1BP1Q5VVH5 260 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 GPR107Q5VW38 600 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PAPD7Q5XG87 772 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 PTRHD1Q6GMV3 140 aaKnown RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TRNP1Q6NT89 227 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 REEP3Q6NUK4 255 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 LEG1Q6P5S2 330 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 C6orf89Q6UWU4 347 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMEM207Q6UWW9 146 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 HACD2Q6Y1H2 254 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 Q6YL49 198 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMEM184AQ6ZMB5 413 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 LEKR1Q6ZMV7 388 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF730Q6ZMV8 503 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF782Q6ZMW2 699 aaPredicted RBP1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF793Q6ZN11 406 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF600Q6ZNG1 722 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 Q6ZRG5 221 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 COLCA1Q6ZS62 124 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 Q6ZVQ6 151 aa1.33□□□□□ -2.2
RNU1-78P-201ENST00000391248 TRMT10CQ7L0Y3 403 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms