RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 CHMP1BQ7LBR1 199 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 NET1Q7Z628 596 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 ARPINQ7Z6K5 226 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 MRGPRGQ86SM5 289 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SLC30A8Q8IWU4 369 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 UBQLNLQ8IYU4 475 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 RPRMLQ8N4K4 120 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 MARVELD2Q8N4S9 558 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 HIPK4Q8NE63 616 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 ITLN2Q8WWU7 325 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 ST8SIA1Q92185 356 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SMPDL3BQ92485 455 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 CCT8L2Q96SF2 557 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 TRIM8Q9BZR9 551 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 NANOGQ9H9S0 305 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 DNAJB12Q9NXW2 375 aaKnown RBP13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 MED12Q93074 2177 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 CD8B2A6NJW9 211 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ETV2O00321 342 aaPredicted RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 SEC14L5O43304 696 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 BCAS1O75363 584 aaPredicted RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 PABPC4LP0CB38 370 aaKnown RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 GLI4P10075 376 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 PRDX6P30041 224 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 RPS3AP61247 264 aaKnown RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 RAC1P63000 192 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 SELENBP1Q13228 472 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 TOMM34Q15785 309 aaPredicted RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ADRM1Q16186 407 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 SLC25A53Q5H9E4 307 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZNF311Q5JNZ3 666 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZNF836Q6ZNA1 936 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 GRAMD2AQ8IUY3 354 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 OR10A6Q8NH74 314 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 FBXO27Q8NI29 283 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZNF563Q8TA94 476 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 CNOT9Q92600 299 aaKnown RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 LRRC37BQ96QE4 947 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 TRIB1Q96RU8 372 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZNF607Q96SK3 696 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 ECSITQ9BQ95 431 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 CALHM2Q9HA72 323 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 EFCAB1Q9HAE3 211 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 AP3M1Q9Y2T2 418 aa13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 PHF3Q92576 2039 aaKnown RBP13.57□□□□□ -0.24
IGHV3-53-201ENST00000390627 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 CFAP73A6NFT4 308 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 GJE1A6NN92 205 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 AIM2O14862 343 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 SERPINB7O75635 380 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 RYKP34925 604 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 TIMP3P35625 211 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 SESN3P58005 492 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 EEF1A1P68104 462 aaKnown RBP13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 PLAURQ03405 335 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ART3Q13508 389 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 RABL3Q5HYI8 236 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZNF550Q7Z398 422 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 PTOV1Q86YD1 416 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ZZZ3Q8IYH5 903 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ASB5Q8WWX0 329 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 SDCCAG3Q96C92 435 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 NPAS1Q99742 590 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 ADAM21Q9UKJ8 722 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 BAHCC1Q9P281 2608 aa13.56□□□□□ -0.24
IGHV3-53-201ENST00000390627 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 CLCA1A8K7I4 914 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 FAAHO00519 579 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 NTN1O95631 604 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 IL2RAP01589 272 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 GP1BBP13224 206 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 AQP1P29972 269 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 CHRNB4P30926 498 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 PCGF2P35227 344 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 NUDT2P50583 147 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 CLDN20P56880 219 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 PDSS1Q5T2R2 415 aa13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 INTS11Q5TA45 600 aaKnown RBP13.55□□□□□ -0.24
IGHV3-53-201ENST00000390627 C3orf33Q6P1S2 294 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms