RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 RHOBTB2Q9BYZ6 727 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 EIF5A2Q9GZV4 153 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ATG10Q9H0Y0 220 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RIMS4Q9H426 269 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LINC00574Q9H8X3 128 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TP53AIP1Q9HCN2 124 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 STARD7Q9NQZ5 370 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ASAH2Q9NR71 780 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPATCH2LQ9NWQ4 482 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GDAP2Q9NXN4 497 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CRNNQ9UBG3 495 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC7A8Q9UHI5 535 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PNMA2Q9UL42 364 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 DERAQ9Y315 318 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 NKTRP30414 1462 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 UBE4BO95155 1302 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 NPHP3Q7Z494 1330 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PCDH11YQ9BZA8 1340 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CDC42BPAQ5VT25 1732 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ROBO3Q96MS0 1386 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SCN2AQ99250 2005 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRPM6Q9BX84 2022 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 NCOA1Q15788 1441 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 DOCK9Q9BZ29 2069 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 GBF1Q92538 1859 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAGI2Q86UL8 1455 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 BCL9LQ86UU0 1499 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM236DA0A1B0GTK5 79 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FUOMA2VDF0 154 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SDHAF1A6NFY7 115 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CEACAM18A8MTB9 384 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 OR7A17O14581 309 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SIGLEC5O15389 551 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SYNGR1O43759 233 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 PIP5K1CO60331 668 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 GFPT2O94808 682 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 NKX2-2O95096 273 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 MBD4O95243 580 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 IFNA1P01562 189 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 HLA-DQA1P01909 254 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CSN3P07498 182 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ADRA2AP08913 450 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ALPIP09923 528 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM236CP0DP71 79 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 UROSP10746 265 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ATF6P18850 670 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 BCKDHBP21953 392 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 HSD17B2P37059 387 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAGEA12P43365 314 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ASCL1P50553 236 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TPD52P55327 224 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FXYD6P3P58550 94 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TFAP4Q01664 338 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 COX6A2Q02221 97 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TLE2Q04725 743 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 EIF3IQ13347 325 aaKnown RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ELAVL3Q14576 367 aaKnown RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 OXA1LQ15070 435 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 PDK2Q15119 407 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC9A3R2Q15599 337 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SYPL1Q16563 259 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 C4orf26Q17RF5 130 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 LRRC26Q2I0M4 334 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 LGALSLQ3ZCW2 172 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ARHGAP29Q52LW3 1261 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CXorf66Q5JRM2 361 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 MARCH8Q5T0T0 291 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ENPP7Q6UWV6 458 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CWC27Q6UX04 472 aaKnown RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 NTM-AS1Q6ZSK4 140 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRMT11Q7Z4G4 463 aaKnown RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPHB5Q86YW7 130 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 C12orf56Q8IXR9 622 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 LINC00337Q8N6G1 96 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM184AQ8NB25 1140 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 LFNGQ8NES3 379 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 FBXO25Q8TCJ0 367 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 DCANP1Q8TF63 244 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 RGP1Q92546 391 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 PIK3R3Q92569 461 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CASP10Q92851 521 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 C10orf35Q96D05 121 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 EID2BQ96D98 161 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ELP4Q96EB1 424 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 MMABQ96EY8 250 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBATAQ96M53 351 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 DACH2Q96NX9 599 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 KLHL5Q96PQ7 755 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 ERGIC2Q96RQ1 377 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 HGH1Q9BTY7 390 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 DDX47Q9H0S4 455 aaKnown RBP-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 IFI27L2Q9H2X8 130 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 KCNK15Q9H427 330 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 THAP9Q9H5L6 903 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHODLQ9H9P2 273 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 LY9Q9HBG7 655 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBC1D13Q9NVG8 400 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 OSER1Q9NX31 292 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 RHCGQ9UBD6 479 aa-1.47□□□□□ -2.64
RNU6-540P-201ENST00000384622 SEC63Q9UGP8 760 aaKnown RBP-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms