RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 SELENONQ9NZV5 590 aa13.31□□□□□ -0.28
SYNGR1-204ENST00000381535 MYOTQ9UBF9 498 aa13.31□□□□□ -0.28
SYNGR1-204ENST00000381535 DMXL2Q8TDJ6 3036 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 SPINK2P20155 84 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 CHMP24386 653 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 ELK4P28324 431 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 GGT2P36268 569 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 DLSTP36957 453 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 STAT5AP42229 794 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 GSSP48637 474 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 FBXW4P57775 412 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 ALDH6A1Q02252 535 aaKnown RBP13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 SKP2Q13309 424 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 CDK5R2Q13319 367 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 PTGES3Q15185 160 aaKnown RBP13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 C6orf141Q5SZD1 244 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 ULK3Q6PHR2 472 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 MARCH9Q86YJ5 346 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 SLC15A4Q8N697 577 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 POGLUT1Q8NBL1 392 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 TTC9Q92623 222 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 HGDQ93099 445 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 FAM46AQ96IP4 442 aaKnown RBP13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 MPP4Q96JB8 637 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 ZNF160Q9HCG1 818 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 BATF3Q9NR55 127 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 CACNA1BQ00975 2339 aa13.3□□□□□ -0.28
SYNGR1-204ENST00000381535 USP24Q9UPU5 2620 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 A0A1W2PQ72 361 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 C21orf140B9A014 251 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 H3BN98 237 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 CHP2O43745 196 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 OR2J2O76002 312 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 TP53P04637 393 aaPredicted RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 CELA2AP08217 269 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 C1QTNF9P0C862 333 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 ICAM2P13598 275 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 F8A1P23610 371 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 EVI2BP34910 448 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 SLC6A8P48029 635 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 IDH2P48735 452 aaKnown RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 NUP107P57740 925 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 PRKCDQ05655 676 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 CTU2Q2VPK5 515 aaKnown RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 ALG10BQ5I7T1 473 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 WBP2NLQ6ICG8 309 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 CBLN3Q6UW01 205 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 LINC00114Q6XXX2 140 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 CDK20Q8IZL9 346 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 TMCO5AQ8N6Q1 288 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 OR5M3Q8NGP4 307 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 FBLIM1Q8WUP2 373 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 UBE2FQ969M7 185 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 NODALQ96S42 347 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 RTN4RQ9BZR6 473 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 FAM117AQ9C073 453 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
SYNGR1-204ENST00000381535 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 ZAR1LA6NP61 321 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 STMND1H3BQB6 276 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 HCRTR2O43614 444 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 SCO2O43819 266 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 PIP5K1CO60331 668 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 SMNDC1O75940 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 SOX14O95416 240 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 IFI30P13284 250 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 RBMS1P29558 406 aaKnown RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 CCR4P51679 360 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 GABREP78334 506 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 KCTD21Q4G0X4 260 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 TMEM236Q5W0B7 351 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 UNQ6494/PRO21346Q6UXR6 183 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 CCDC71Q8IV32 467 aaPredicted RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 MISPQ8IVT2 679 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 TSPAN14Q8NG11 270 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 ZNF563Q8TA94 476 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 DUSP19Q8WTR2 217 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 NACC2Q96BF6 587 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 SH3YL1Q96HL8 342 aaPredicted RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 ADNPQ9H2P0 1102 aa13.28□□□□□ -0.28
SYNGR1-204ENST00000381535 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms