RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 VRK1Q99986 396 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZNF559Q9BR84 538 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SLIRPQ9GZT3 109 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ACTR10Q9NZ32 417 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PTPRDP23468 1912 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 URB1O60287 2271 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 NPIPA5A0A0B4J1W7 369 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 RHPN2P1A8MT19 583 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PRAF2O60831 178 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SNAPINO95295 136 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SOD2P04179 222 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 S100A11P31949 105 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 FCN2Q15485 313 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CCNJQ5T5M9 372 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 NXNL2Q5VZ03 156 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TECPR1Q7Z6L1 1165 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 RBM45Q8IUH3 476 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 OR6T1Q8NGN1 323 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SLC23A1Q9UHI7 598 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 LRP5O75197 1615 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TSTD3H0UI37 97 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 EIF3FO00303 357 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TSPAN15O95858 294 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 FURINP09958 794 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 AKAIN1P0CW23 69 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 MFSD13AQ14CX5 517 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CLVS2Q5SYC1 327 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 MRPL2Q5T653 305 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 VRK3Q8IV63 474 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 GHSRQ92847 366 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 LRRC46Q96FV0 321 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 LRIG1Q96JA1 1093 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZNF582Q96NG8 517 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 HIST1H2AAQ96QV6 131 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZNF304Q9HCX3 659 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TMEM184CQ9NVA4 438 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 MDC1Q14676 2089 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ACOD1A6NK06 481 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 WASH4PA8MWX3 477 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TMEM150CB9EJG8 249 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 UBBP0CG47 229 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 UBCP0CG48 685 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TGM1P22735 817 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TPMTP51580 245 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PFN3P60673 137 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 RPS25P62851 125 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CXADRP78310 365 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 HTR4Q13639 388 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 GBX1Q14549 363 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 FAM122CQ6P4D5 195 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZNF679Q8IYX0 411 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 HORMAD2Q8N7B1 307 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 OR4M1Q8NGD0 313 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SLC7A13Q8TCU3 470 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CPPED1Q9BRF8 314 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 C2orf42Q9NWW7 574 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SHANK3Q9BYB0 1731 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 TVP23AA6NH52 213 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 H0YIV9 168 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PRAMEF2O60811 474 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 IGFBP6P24592 240 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 DLX5P56178 289 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SIM1P81133 766 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 XKR7Q5GH72 579 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CHRDL2Q6WN34 429 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PLA2G15Q8NCC3 412 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 IL17RDQ8NFM7 739 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZFAND1Q8TCF1 268 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CREB3L4Q8TEY5 395 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CDS1Q92903 461 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 PEX11GQ96HA9 241 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 DPYSL5Q9BPU6 564 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 OR8D2Q9GZM6 311 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SERINC1Q9NRX5 453 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SDHAF2Q9NX18 166 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ABRACLQ9P1F3 81 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 KNL1Q8NG31 2342 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 OR52A4PA6NMU1 304 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 F13BP05160 661 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SBK3P0C264 359 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 UGT2B7P16662 529 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 BLKP51451 505 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 FXYD4P59646 89 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 RPL19P84098 196 aaKnown RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SORDQ00796 357 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 SGCBQ16585 318 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 AADACL4Q5VUY2 407 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CARD17Q5XLA6 110 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 RAB11FIP2Q7L804 512 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 NLRC3Q7RTR2 1065 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ZNF680Q8NEM1 530 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 ACOT11Q8WXI4 607 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-201ENST00000380152 CSF3RQ99062 836 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 UQCC2Q9BRT2 126 aa3.93□□□□□ -1.78
BRCA2-201ENST00000380152 KATNB1Q9BVA0 655 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms