RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TSPAN11A1L157 253 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SERPINA5P05154 406 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GSTP1P09211 210 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GCGRP47871 477 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 IRF9Q00978 393 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 XAF1Q6GPH4 301 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GPR160Q9UJ42 338 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PRAMEF33A0A0G2JMD5 474 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PRAMEF10O60809 474 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR2W3Q7Z3T1 314 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 V9GYQ6 96 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CD14P08571 375 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CTSHP09668 335 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 AGXTP21549 392 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 AGTR2P50052 363 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 RPS3AP61247 264 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR4M1Q8NGD0 313 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PINX1Q96BK5 328 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SGCZQ96LD1 299 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CCL27Q9Y4X3 112 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FARS2O95363 451 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TGFB1P01137 390 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HIST2H3PS2Q5TEC6 136 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HSD17B13Q7Z5P4 300 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FRMD1Q8N878 549 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HPSE2Q8WWQ2 592 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 YIPF1Q9Y548 306 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TK1P04183 234 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ARSDP51689 593 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PRKAG1P54619 331 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ZER1Q7Z7L7 766 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR5AP2Q8NGF4 316 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SLC17A9Q9BYT1 436 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TPOP07202 933 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 NTSR1P30989 418 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HBEGFQ99075 208 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ACTL7AQ9Y615 435 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 IQCF3P0C7M6 154 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HBA1P69905 142 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ABCA11PQ4W5N1 156 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TCEAL6Q6IPX3 200 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CYHR1Q6ZMK1 362 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 NPWQ8N729 165 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR5B2Q96R09 309 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 C12orf71A8MTZ7 269 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SYT7O43581 403 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 PUDPQ08623 228 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ARHGAP11BQ3KRB8 267 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ALG10Q5BKT4 473 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CES4AQ5XG92 561 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TXNL4BQ9NX01 149 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SOCS7O14512 581 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DIRAS3O95661 229 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR10G6Q8NH81 332 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GPR174Q9BXC1 333 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 WDR76Q9H967 626 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR7A17O14581 309 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TNFSF14O43557 240 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ACVRL1P37023 503 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 RBMXP38159 391 aaKnown RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 MALLQ13021 153 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 STEAP3Q658P3 488 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 Q6ZVL8 140 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DGAT2Q96PD7 388 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TP63Q9H3D4 680 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GABRQQ9UN88 632 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 BNIP3LO60238 219 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 HLA-DQB1P01920 261 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 GPLD1P80108 840 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FAM209AQ5JX71 171 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 DPPA3Q6W0C5 159 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR7D4Q8NG98 312 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ASB5Q8WWX0 329 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 BRI3BPQ8WY22 251 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ST8SIA1Q92185 356 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 C20orf27Q9GZN8 174 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CLDN7O95471 211 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM128Q5BJH2 165 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 C12orf45Q8N5I9 185 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-201ENST00000377861 OR52B6Q8NGF0 335 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 WDR20Q8TBZ3 569 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 TXN2Q99757 166 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SAP130Q9H0E3 1048 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 CHRDQ9H2X0 955 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 SULT2B1O00204 365 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FAM71E2Q8N5Q1 922 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 C3orf58Q8NDZ4 430 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 FZD3Q9NPG1 666 aa4.62□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF852Q6ZMS4 543 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CIB3Q96Q77 187 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TEX101Q9BY14 249 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GPR83Q9NYM4 423 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RPH3AQ9Y2J0 694 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ETV3P41162 512 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TCTN3Q6NUS6 607 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NUP43Q8NFH3 380 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CD300LFQ8TDQ1 290 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 METTL8Q9H825 291 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms