RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 A0A0A6YYD5 115 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 A0A1W2PR48 441 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 C4orf51C9J302 202 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LRRN3E7EW58 273 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 KLF4O43474 513 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 SERPINI2O75830 405 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 MT-ND5P03915 603 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 NOS3P29474 1203 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PDX1P52945 283 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LBX1P52954 281 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PRMT2P55345 433 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 MLC1Q15049 377 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 ZMYND11Q15326 602 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 DECR1Q16698 335 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 GARNL3Q5VVW2 1013 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 ARSKQ6UWY0 536 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 MBOAT2Q6ZWT7 520 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 OR9A2Q8NGT5 310 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 OR5J2Q8NH18 312 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 OR56B4Q8NH76 319 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LINC00615Q96LM1 132 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 KLHL15Q96M94 604 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 SFXN2Q96NB2 322 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LRRN3Q9H3W5 708 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 C6orf106Q9H6K1 298 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 COPZ2Q9P299 210 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 GPR34Q9UPC5 381 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 FKBP7Q9Y680 259 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 KHNYNO15037 678 aaKnown RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 TIMP1P01033 207 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PROS1P07225 676 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 BMP8BP34820 402 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 CTNNB1P35222 781 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 GDNFP39905 211 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 MMP15P51511 669 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 HCCSP53701 268 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 SIM1P81133 766 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 SHC2P98077 582 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 OPCMLQ14982 345 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LTB4RQ15722 352 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PRPF38BQ5VTL8 546 aaKnown RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PTP4A1Q93096 173 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 KISS1RQ969F8 398 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 ORAI1Q96D31 301 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 ELMOD3Q96FG2 381 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 ZNF514Q96K75 400 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 XKR8Q9H6D3 395 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 C20orf141Q9NUB4 165 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 LYARQ9NX58 379 aaKnown RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
COL9A2-202ENST00000372748 AK6Q9Y3D8 172 aaKnown RBP13.74□□□□□ -0.21
COL9A2-202ENST00000372748 PLPP2O43688 288 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TFP02787 698 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TEAD1P28347 426 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 HNRNPA1L2Q32P51 320 aaKnown RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TPRA1Q86W33 373 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 GID4Q8IVV7 300 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 OR11G2Q8NGC1 345 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 PFN4Q8NHR9 129 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 OTUB2Q96DC9 234 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 PGLYRP3Q96LB9 341 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SDHAF2Q9NX18 166 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CXXC1Q9P0U4 656 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ENTPD4Q9Y227 616 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 KCNMB2Q9Y691 235 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 PTPRSQ13332 1948 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CENPVL1A0A0U1RR11 272 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CDHR4A6H8M9 788 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SYT5O00445 386 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 PEX14O75381 377 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ICAM2P13598 275 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 REEP5Q00765 189 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 KLF9Q13886 244 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ZNF234Q14588 700 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 FAAP20Q6NZ36 180 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SSX6Q7RTT6 188 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 C12orf76Q8N812 135 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TOR1AIP2Q8NFQ8 470 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ZNF671Q8TAW3 534 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 GANCQ8TET4 914 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 WBP1Q96G27 269 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 AIFM2Q9BRQ8 373 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ZC4H2Q9NQZ6 224 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms