RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 SMAD5Q99717 465 aaKnown RBP10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 FNDC11Q9BVV2 318 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 TRIM2Q9C040 744 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 NMNAT1Q9HAN9 279 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 KLHL1Q9NR64 748 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 MAN2C1Q9NTJ4 1040 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 MED11Q9P086 117 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 FBXL2Q9UKC9 423 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 CSAG2Q9Y5P2 127 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 MED13Q9UHV7 2174 aa10.49□□□□□ -0.73
CALCOCO2-202ENST00000372317 TRBV4-1A0A0J9YWV2 114 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TRAPPC13A5PLN9 417 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 PINLYPA6NC86 204 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ANKUB1A6NFN9 424 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TNFRSF11BO00300 401 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 FAAHO00519 579 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 CDK2AP1O14519 115 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 DPM1O60762 260 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TRIM3O75382 744 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 SNX4O95219 450 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 GADD45GO95257 159 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 LYPD3O95274 346 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 THY1P04216 161 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ZNF23P17027 643 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 PGCP20142 388 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 PTNP21246 168 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 FPR1P21462 350 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ELAVL4P26378 380 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 IDH2P48735 452 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 COPZ1P61923 177 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 CBFBQ13951 182 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 QPRTQ15274 297 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 SNCBQ16143 134 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TBR1Q16650 682 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 EXOC3L2Q2M3D2 409 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 COLEC12Q5KU26 742 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 LPCAT4Q643R3 524 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ZNF613Q6PF04 617 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 GDF7Q7Z4P5 450 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TMEM179BQ7Z7N9 219 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 PACS2Q86VP3 889 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 HS3ST5Q8IZT8 346 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 FADS6Q8N9I5 356 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 NRG4Q8WWG1 115 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 NR4A3Q92570 626 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 SLC41A3Q96GZ6 507 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 BDH2Q9BUT1 245 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 POLR2J2Q9GZM3 115 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 POLR2J3Q9H1A7 115 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 DSN1Q9H410 356 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ACER3Q9NUN7 267 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 TUBA8Q9NY65 449 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 STOML1Q9UBI4 398 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 RPS6KB2Q9UBS0 482 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 SLC7A7Q9UM01 511 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 OAZ3Q9UMX2 235 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 KLF13Q9Y2Y9 288 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 PCDHGA9Q9Y5G4 932 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CALCOCO2-202ENST00000372317 CASQ2O14958 399 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 CHP2O43745 196 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 PDGFAP04085 211 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 CD46P15529 392 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 TCEA1P23193 301 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 MSX1P28360 303 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 DNAJA1P31689 397 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 IFNA8P32881 189 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 LIMS1P48059 325 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 CD97P48960 835 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 TNFSF10P50591 281 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 ST3GAL3Q11203 375 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 FOXF1Q12946 379 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 TRAM2Q15035 370 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 SEC23BQ15437 767 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 ZNF766Q5HY98 468 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 ALG10BQ5I7T1 473 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 TIGD3Q6B0B8 471 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 WBP2NLQ6ICG8 309 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 SLC25A25Q6KCM7 469 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 SHQ1Q6PI26 577 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 ARSKQ6UWY0 536 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 WDR88Q6ZMY6 472 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 GALNTL5Q7Z4T8 443 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 PLCZ1Q86YW0 608 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 LSMEM1Q8N8F7 131 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 CATSPER1Q8NEC5 780 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 OR2M7Q8NG81 312 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 GPR119Q8TDV5 335 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 SNRNP27Q8WVK2 155 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 HAS2Q92819 552 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 EXTL1Q92935 676 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 EME1Q96AY2 570 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 C3orf49Q96BT1 292 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 C1GALT1C1Q96EU7 318 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 SCMH1Q96GD3 660 aa10.47□□□□□ -0.73
CALCOCO2-202ENST00000372317 CRELD1Q96HD1 420 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms