RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 FAIMQ9NVQ4 179 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 IL20Q9NYY1 176 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 LRIT1Q9P2V4 623 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 SEC14L4Q9UDX3 406 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CFL2Q9Y281 166 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 EXOSC1Q9Y3B2 195 aaKnown RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 CDH10Q9Y6N8 788 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CDHR4A6H8M9 788 aa13□□□□□ -0.33
LDB3-204ENST00000372066 KDM4EB2RXH2 506 aaPredicted RBP13□□□□□ -0.33
LDB3-204ENST00000372066 CLDN4O14493 209 aa13□□□□□ -0.33
LDB3-204ENST00000372066 FRS3O43559 492 aa13□□□□□ -0.33
LDB3-204ENST00000372066 HSMCR30P0CW71 290 aa13□□□□□ -0.33
LDB3-204ENST00000372066 GALNSP34059 522 aa13□□□□□ -0.33
LDB3-204ENST00000372066 IDUAP35475 653 aa13□□□□□ -0.33
LDB3-204ENST00000372066 SOX6P35712 828 aa13□□□□□ -0.33
LDB3-204ENST00000372066 MAZP56270 477 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 PPP1CAP62136 330 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ID2Q02363 134 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 TMED1Q13445 227 aa13□□□□□ -0.33
LDB3-204ENST00000372066 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 RGS21Q2M5E4 152 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
LDB3-204ENST00000372066 IGFN1Q86VF2 1251 aa13□□□□□ -0.33
LDB3-204ENST00000372066 SFTPA2Q8IWL1 248 aa13□□□□□ -0.33
LDB3-204ENST00000372066 SLC34A3Q8N130 599 aa13□□□□□ -0.33
LDB3-204ENST00000372066 SLC43A2Q8N370 569 aa13□□□□□ -0.33
LDB3-204ENST00000372066 EXD3Q8N9H8 876 aa13□□□□□ -0.33
LDB3-204ENST00000372066 C7orf57Q8NEG2 295 aa13□□□□□ -0.33
LDB3-204ENST00000372066 OIT3Q8WWZ8 545 aa13□□□□□ -0.33
LDB3-204ENST00000372066 FAM46AQ96IP4 442 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 OPALINQ96PE5 141 aa13□□□□□ -0.33
LDB3-204ENST00000372066 CMKLR1Q99788 373 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ZNF559Q9BR84 538 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ARHGAP9Q9BRR9 750 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ZBTB20Q9HC78 741 aaPredicted RBP13□□□□□ -0.33
LDB3-204ENST00000372066 RNF215Q9Y6U7 377 aa13□□□□□ -0.33
LDB3-204ENST00000372066 PMF1-BGLAPU3KQ54 211 aa13□□□□□ -0.33
LDB3-204ENST00000372066 ASH1LQ9NR48 2969 aaKnown RBP13□□□□□ -0.33
LDB3-204ENST00000372066 TMEM129A0AVI4 362 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 TLCD2A6NGC4 264 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 ZNF749O43361 778 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 CTNSO60931 367 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 CBX7O95931 251 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 PNLIPP16233 465 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 MYL12AP19105 171 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 CD40LGP29965 261 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 PSMD4P55036 377 aaKnown RBP12.99□□□□□ -0.33
LDB3-204ENST00000372066 C14orf28Q4W4Y0 310 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
LDB3-204ENST00000372066 PHF19Q5T6S3 580 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 ZNF613Q6PF04 617 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 ATCAYQ86WG3 371 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
LDB3-204ENST00000372066 NKAIN4Q8IVV8 208 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 MFSD4AQ8N468 514 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 POGLUT1Q8NBL1 392 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 OR52I1Q8NGK6 324 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 OR8D4Q8NGM9 314 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 BRIX1Q8TDN6 353 aaKnown RBP12.99□□□□□ -0.33
LDB3-204ENST00000372066 HS6ST2Q96MM7 605 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 PLA2G12AQ9BZM1 189 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 FAM117AQ9C073 453 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 DSN1Q9H410 356 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 EGLN3Q9H6Z9 239 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
LDB3-204ENST00000372066 SLC7A7Q9UM01 511 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
LDB3-204ENST00000372066 J3QRK9 145 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 PRAMEF2O60811 474 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 SULT1C4O75897 302 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CT62P0C5K7 136 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 LIPCP11150 499 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 PSMA1P25786 263 aaKnown RBP12.98□□□□□ -0.33
LDB3-204ENST00000372066 GABRA3P34903 492 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 INAQ16352 499 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 DEFB110Q30KQ9 67 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 PGGHGQ32M88 737 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 ZNF438Q7Z4V0 828 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 NRMQ8IXM6 262 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 CMIPQ8IY22 773 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 OR2T33Q8NG76 320 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 OR52R1Q8NGF1 315 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 EXTL1Q92935 676 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 OR51E2Q9H255 320 aa12.98□□□□□ -0.33
LDB3-204ENST00000372066 FOLH1BQ9HBA9 442 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms