RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ACSF3Q4G176 576 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 INTS11Q5TA45 600 aaKnown RBP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 B3GNT6Q6ZMB0 384 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 NCCRP1Q6ZVX7 275 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF440Q8IYI8 595 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 GPR119Q8TDV5 335 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 SSC4DQ8WTU2 575 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 TMEM234Q8WY98 164 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 REXO5Q96IC2 774 aaKnown RBP13.41□□□□□ -0.26
COL9A1-204ENST00000370496 TMEM185BQ9H7F4 350 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 SLC13A4Q9UKG4 626 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 FLNCQ14315 2725 aa13.41□□□□□ -0.26
COL9A1-204ENST00000370496 HEATR5AQ86XA9 2040 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 MED12Q93074 2177 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ARHGAP21Q5T5U3 1957 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 CLEC18AA5D8T8 446 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 CFAP73A6NFT4 308 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ZG16O60844 167 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 SERPINB7O75635 380 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 LDLRP01130 860 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF708P17019 499 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PRKCAP17252 672 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PRKAR1BP31321 381 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 CLDN18P56856 261 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 EEF1A1P68104 462 aaKnown RBP13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PLAURQ03405 335 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL9A1-204ENST00000370496 VMACQ2NL98 169 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 TMEM211Q6ICI0 200 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 CLEC18BQ6UXF7 455 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 RPTNQ6XPR3 784 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 HACD2Q6Y1H2 254 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 RPRMLQ8N4K4 120 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 CLEC18CQ8NCF0 446 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 FBXO27Q8NI29 283 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PHF10Q8WUB8 498 aaKnown RBP13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ST8SIA1Q92185 356 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PHF3Q92576 2039 aaKnown RBP13.4□□□□□ -0.26
COL9A1-204ENST00000370496 MRGPRX4Q96LA9 322 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 TRIB1Q96RU8 372 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 TAGLN3Q9UI15 199 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 AP3M1Q9Y2T2 418 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF337Q9Y3M9 751 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 FAM215AQ9Y5M1 114 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
COL9A1-204ENST00000370496 PRORSD1PA6NEY8 169 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 CCT8L1PA6NM43 557 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 AHRRA9YTQ3 701 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 FAM220BPB1ANY3 271 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 AP3D1O14617 1153 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 HOXD4P09016 255 aaPredicted RBP13.39□□□□□ -0.27
COL9A1-204ENST00000370496 GP1BBP13224 206 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 CPN1P15169 458 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 SLC7A2P52569 658 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 SMSP52788 366 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 MXRA7P84157 204 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 SELENBP1Q13228 472 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 BCL2A1Q16548 175 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 FAM91A1Q658Y4 838 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 CHMP1BQ7LBR1 199 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 OR2T12Q8NG77 320 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 DMRTA2Q96SC8 542 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 NPAS1Q99742 590 aa13.39□□□□□ -0.27
COL9A1-204ENST00000370496 HOPXQ9BPY8 73 aaPredicted RBP13.39□□□□□ -0.27
COL9A1-204ENST00000370496 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 GJE1A6NN92 205 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 EIF1AYO14602 144 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 DNAJA2O60884 412 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 OPN1SWP03999 348 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 GKN3PP0CG01 181 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 ADH6P28332 368 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 SFTPDP35247 375 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 CLDN20P56880 219 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 PCBP3P57721 371 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 NUP107P57740 925 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 EEFSECP57772 596 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 SESN3P58005 492 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 RPS3AP61247 264 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 NCALDP61601 193 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 COPZ1P61923 177 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 ADORA2A-AS1P86434 159 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 MERTKQ12866 999 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 EPS8Q12929 822 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 RTL6Q6ICC9 239 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 PPP4R4Q6NUP7 873 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 C3orf33Q6P1S2 294 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF550Q7Z398 422 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 PATL1Q86TB9 770 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 CALHM3Q86XJ0 350 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 GRAMD2AQ8IUY3 354 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 LACC1Q8IV20 430 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 MARVELD2Q8N4S9 558 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms