RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 CTSL3PQ5NE16 218 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CCNJQ5T5M9 372 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 Q6ZVU0 165 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 RDH10Q8IZV5 341 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SLC7A13Q8TCU3 470 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SCARB1Q8WTV0 552 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF75AQ96N20 296 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF582Q96NG8 517 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 TSGA13Q96PP4 275 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ACTL8Q9H568 366 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 V9GYH0 126 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 AKAP6Q13023 2319 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 LAMA3Q16787 3333 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 TEX13DA0A0J9YY54 714 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF593O00488 134 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 TSPAN6O43657 245 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SLC34A2O95436 690 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 PPP1R3DO95685 299 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 HIST1H2ABP04908 130 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 HOXB6P17509 224 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 TIA1P31483 386 aaKnown RBP eCLIP7.24□□□□□ -1.25
UFL1-201ENST00000369278 CTNNB1P35222 781 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MAPK8P45983 427 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 PSMD8P48556 350 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 RAB13P51153 203 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 RAP2BP61225 183 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SNRPD1P62314 119 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 ST3GAL3Q11203 375 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 IRF5Q13568 498 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF273Q14593 569 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 KCNAB1Q14722 419 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ETFDHQ16134 617 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ACTBL2Q562R1 376 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MEDAGQ5VYS4 303 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 RBMS3Q6XE24 437 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 HIST3H2AQ7L7L0 130 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 LILRA3Q8N6C8 439 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 THAP4Q8WY91 577 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 HIST1H2ACQ93077 130 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 TMEM41AQ96HV5 264 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 GJD4Q96KN9 370 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 DERL3Q96Q80 235 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 OR2M4Q96R27 311 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 OR1F2PQ96R84 312 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MIXL1Q9H2W2 232 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MVB12BQ9H7P6 319 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ISG20L2Q9H9L3 353 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 LIN7BQ9HAP6 207 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 TMEM27Q9HBJ8 222 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ASAH2Q9NR71 780 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 NME7Q9Y5B8 376 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF878C9JN71 531 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 C11orf98E9PRG8 122 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CLDN11O75508 207 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CDC123O75794 336 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 RAB3DO95716 219 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF28P17035 718 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MAT2AP31153 395 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 RPL3P39023 403 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 ALDH3B1P43353 468 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CAMLGP49069 296 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SKP2Q13309 424 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 RSU1Q15404 277 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 TGIF1Q15583 401 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 HIST2H3AQ71DI3 136 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SAMD14Q8IZD0 417 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 OR1M1Q8NGA1 313 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ISL2Q96A47 359 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ZNF707Q96C28 371 aaPredicted RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 HHIPL1Q96JK4 782 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SLC2A13Q96QE2 648 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CCDC3Q9BQI4 270 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ACBD6Q9BR61 282 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 MED18Q9BUE0 208 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SMG9Q9H0W8 520 aaKnown RBP7.24□□□□□ -1.25
UFL1-201ENST00000369278 TXNRD2Q9NNW7 524 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 TMEM30AQ9NV96 361 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 CKLFQ9UBR5 152 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 ERVW-1Q9UQF0 538 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SBF2Q86WG5 1849 aa7.24□□□□□ -1.25
UFL1-201ENST00000369278 SCAF4O95104 1147 aaKnown RBP7.23□□□□□ -1.25
UFL1-201ENST00000369278 WNT1P04628 370 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 TRAPPC2P0DI81 140 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 TRAPPC2BP0DI82 140 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 AMD1P17707 334 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 CD53P19397 219 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 PI3P19957 117 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 CCKBRP32239 447 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 MPIP34949 423 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 IDH3GP51553 393 aaPredicted RBP7.23□□□□□ -1.25
UFL1-201ENST00000369278 CASP6P55212 293 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 CXADRP78310 365 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 CDC42EP1Q00587 391 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 SCAPQ12770 1279 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 SYT14P1Q58G82 188 aa7.23□□□□□ -1.25
UFL1-201ENST00000369278 ZNF705AQ6ZN79 300 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms