RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SGPP1Q9BX95 441 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ATXN7L1Q9ULK2 861 aaPredicted RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 SLC35A3Q9Y2D2 325 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PLEKHM1Q9Y4G2 1056 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ALG5Q9Y673 324 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TVP23AA6NH52 213 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 C17orf105B2RV13 164 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TMPRSS11DO60235 418 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 MT-ND4P03905 459 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 HOXC8P31273 242 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NFATC4Q14934 902 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NSDHLQ15738 373 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 CTF1Q16619 201 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 CDNFQ49AH0 187 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NXNL2Q5VZ03 156 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PAQR6Q6TCH4 344 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ZNF283Q8N7M2 679 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 EID2BQ96D98 161 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PITX2Q99697 317 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 C19orf43Q9BQ61 176 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TPSD1Q9BZJ3 242 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 AKIP1Q9NQ31 210 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SIDT1Q9NXL6 827 aaKnown RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 CPNE7Q9UBL6 633 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ARPC1BO15143 372 aaKnown RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 RFPL3O75679 317 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 NR2C1P13056 603 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PRKAR1BP31321 381 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PTH2RP49190 550 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TIAL1Q01085 375 aaKnown RBP eCLIP10.9□□□□□ -0.662e-7■■■■□ 26.7
COPA-202ENST00000368069 METRNLQ641Q3 311 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 METAP1DQ6UB28 335 aaPredicted RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 TMEM151BQ8IW70 566 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 OR9A4Q8NGU2 314 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 ELP4Q96EB1 424 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 KLHL15Q96M94 604 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 SLC6A7Q99884 636 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 CDCA4Q9BXL8 241 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 CNTRLQ7Z7A1 2325 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 FAM221BA6H8Z2 402 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PIP5K1CO60331 668 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 CSTBP04080 98 aaKnown RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 CFIP05156 583 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PNMTP11086 282 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PCGF3Q3KNV8 242 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TCTE1Q5JU00 501 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TMEM225Q6GV28 225 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 FBXO46Q6PJ61 603 aaPredicted RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 TECPR1Q7Z6L1 1165 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 UBQLNLQ8IYU4 475 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TMEM156Q8N614 296 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 SLC16A11Q8NCK7 471 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 VN1R2Q8NFZ6 395 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 CCDC120Q96HB5 630 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 MYADMQ96S97 322 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 SIPA1L1O43166 1804 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 SLC9B1P1A6NJY1 282 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 C9J4A7 227 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 ZNF208O43345 1280 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 UGT2B7P16662 529 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 FPR3P25089 353 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 SHC1P29353 583 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 CEBPGP53567 150 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 MCATQ8IVS2 390 aaKnown RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 RNF113BQ8IZP6 322 aaKnown RBP10.9□□□□□ -0.66
COPA-202ENST00000368069 NAXEQ8NCW5 288 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 SPPL3Q8TCT6 385 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 PTGES2Q9H7Z7 377 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 NT5DC2Q9H857 520 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TREM1Q9NP99 234 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 TAS2R8Q9NYW2 309 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 MLXQ9UH92 298 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 OSGIN1Q9UJX0 560 aa10.9□□□□□ -0.66
COPA-202ENST00000368069 LRIT2A6NDA9 550 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 IFNA21P01568 189 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 TFP02787 698 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 RBMS1P29558 406 aaKnown RBP10.9□□□□□ -0.67
COPA-202ENST00000368069 PKLRP30613 574 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 HTR1FP30939 366 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 ETV5P41161 510 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 ETV1P50549 477 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 SERTAD2Q14140 314 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 KIAA0040Q15053 153 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 GRK1Q15835 563 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 HBMQ6B0K9 141 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 TPRA1Q86W33 373 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 BEST4Q8NFU0 473 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 OR5J2Q8NH18 312 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 TMEM185BQ9H7F4 350 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 SEMA4GQ9NTN9 838 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 HPF1Q9NWY4 346 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 GSKIPQ9P0R6 139 aa10.9□□□□□ -0.67
COPA-202ENST00000368069 PRRT4C9JH25 899 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms