RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RSPO4Q2I0M5 234 aaPredicted RBP8.68□□□□□ -1.02
VTA1-201ENST00000367621 ZNF791Q3KP31 576 aaPredicted RBP8.68□□□□□ -1.02
VTA1-201ENST00000367621 FGD3Q5JSP0 725 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 DCST1Q5T197 706 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 UGT2A3Q6UWM9 527 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 PLEKHM3Q6ZWE6 761 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 NUP54Q7Z3B4 507 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 GALNT5Q7Z7M9 940 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ZNF295-AS1Q8N0V1 137 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 SLC15A4Q8N697 577 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ZNF614Q8N883 585 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 LSMEM1Q8N8F7 131 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 GATSQ8NAP1 163 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 GRHL3Q8TE85 626 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 PSMF1Q92530 271 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 SDCCAG3Q96C92 435 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 RASL10BQ96S79 203 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ZNF559Q9BR84 538 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 DGCR6LQ9BY27 220 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ANKRD60Q9BZ19 345 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 LAT2Q9GZY6 243 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ANKRD19PQ9H560 264 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 ARMC7Q9H6L4 198 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
VTA1-201ENST00000367621 SH2D2AQ9NP31 389 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 EXOSC3Q9NQT5 275 aaKnown RBP8.68□□□□□ -1.02
VTA1-201ENST00000367621 P4HTMQ9NXG6 502 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 REV1Q9UBZ9 1251 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 TESQ9UGI8 421 aaKnown RBP8.68□□□□□ -1.02
VTA1-201ENST00000367621 SLC35A3Q9Y2D2 325 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 KNTC1P50748 2209 aa8.68□□□□□ -1.02
VTA1-201ENST00000367621 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 SCDO00767 359 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CDK2AP1O14519 115 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 WISP1O95388 367 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CLIC3O95833 236 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 SERPINA7P05543 415 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 UBL4AP11441 157 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ANXA8P13928 327 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 MYF6P23409 242 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 EVI2BP34910 448 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 KRT20P35900 424 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 SOX3P41225 446 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ARHGDIAP52565 204 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 NRG3P56975 720 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ZNF117Q03924 483 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ST3GAL3Q11203 375 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ATP1A4Q13733 1029 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 EFR3AQ14156 821 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 PDK3Q15120 406 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 NTRK2Q16620 822 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 SDK2Q58EX2 2172 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 FCRLBQ6BAA4 426 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 C1orf94Q6P1W5 598 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ZNF613Q6PF04 617 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CD300LDQ6UXZ3 194 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ZNF550Q7Z398 422 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 RANBP3LQ86VV4 465 aaPredicted RBP8.67□□□□□ -1.02
VTA1-201ENST00000367621 CCDC71Q8IV32 467 aaPredicted RBP8.67□□□□□ -1.02
VTA1-201ENST00000367621 APLFQ8IW19 511 aaPredicted RBP8.67□□□□□ -1.02
VTA1-201ENST00000367621 Q8N3U1 123 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 DHRSXQ8N5I4 330 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ATG16L2Q8NAA4 619 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ZNF527Q8NB42 609 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 AQP11Q8NBQ7 271 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 PHOSPHO1Q8TCT1 267 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 TMEM255BQ8WV15 326 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 AHCTF1Q8WYP5 2266 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 TTC9Q92623 222 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 GATA6Q92908 595 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ZNF426Q9BUY5 554 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 GABARAPL3Q9BY60 117 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 TRIM2Q9C040 744 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CDCP1Q9H5V8 836 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 TMCC3Q9ULS5 477 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 SLC7A7Q9UM01 511 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 ICAM5Q9UMF0 924 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CARD8Q9Y2G2 431 aa8.67□□□□□ -1.02
VTA1-201ENST00000367621 CNOT1A5YKK6 2376 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 ZNF264O43296 627 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 PIP5K1CO60331 668 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 EIF4E2O60573 245 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 ITGA10O75578 1167 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 OR6B1O95007 311 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ANGPTL1O95841 491 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ADAP00813 363 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 IGFBP1P08833 259 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 ICAM2P13598 275 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 LIFP15018 202 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 WT1P19544 449 aaPredicted RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 RYKP34925 604 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 OMPP47874 163 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 ST13P50502 369 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 UGT2B15P54855 530 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 SRSF6Q13247 344 aaKnown RBP8.66□□□□□ -1.02
VTA1-201ENST00000367621 MED21Q13503 144 aa8.66□□□□□ -1.02
VTA1-201ENST00000367621 TOMM34Q15785 309 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms