RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PLOD1Q02809 727 aaPredicted RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 SLC25A11Q02978 314 aaKnown RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 TSTA3Q13630 321 aaPredicted RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 RCAN2Q14206 197 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 FRG1Q14331 258 aaKnown RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 GGTLC2Q14390 218 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 MED22Q15528 200 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 TAF1AQ15573 450 aaPredicted RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 PGGHGQ32M88 737 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 GSTA5Q7RTV2 222 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 VN1R4Q7Z5H5 301 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 ADCK2Q7Z695 626 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 KIAA1328Q86T90 577 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 SNX31Q8N9S9 440 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 HMGCLL1Q8TB92 370 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 ERGIC1Q969X5 290 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 STARD4Q96DR4 205 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 VMP1Q96GC9 406 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 TUBA1CQ9BQE3 449 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 CCDC77Q9BR77 488 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 KLHL4Q9C0H6 718 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 PROK2Q9HC23 129 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 CISD1Q9NZ45 108 aaKnown RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 BOKQ9UMX3 212 aaPredicted RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 RUVBL2Q9Y230 463 aaKnown RBP6.3□□□□□ -1.4
H3F3A-201ENST00000366813 B3GALT5Q9Y2C3 310 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 ADAM18Q9Y3Q7 739 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 HEY1Q9Y5J3 304 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 TENM3Q9P273 2699 aa6.3□□□□□ -1.4
H3F3A-201ENST00000366813 IGKV3D-11A0A0A0MRZ8 115 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 LIPT2A6NK58 231 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 CLOCKO15516 846 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 CHST10O43529 356 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 SHOX2O60902 331 aaPredicted RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 PTP4A3O75365 173 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 LRATO95237 230 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 EZRP15311 586 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 IL10P22301 178 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 PCYT1AP49585 367 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 DSCR9P59020 149 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 ARF1P84077 181 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 LGALS3BPQ08380 585 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 CSTF3Q12996 717 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 TEX44Q53QW1 395 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 HSP90AA4PQ58FG1 418 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 SLC22A10Q63ZE4 541 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 ADAM5Q6NVV9 412 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 TTC23LQ6PF05 361 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 CLEC17AQ6ZS10 378 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 LINGO2Q7L985 606 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 HUS1BQ8NHY5 278 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 ZPLD1Q8TCW7 415 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 C10orf105Q8TEF2 133 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 MRPL24Q96A35 216 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 RAD51AP1Q96B01 352 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 ZNF830Q96NB3 372 aaPredicted RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 ZFP3Q96NJ6 502 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 WDFY2Q96P53 400 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 KRT12Q99456 494 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 APOL2Q9BQE5 337 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 SLC39A3Q9BRY0 314 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 TRAF4Q9BUZ4 470 aaPredicted RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 METTL17Q9H7H0 456 aaPredicted RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 EIF2B3Q9NR50 452 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 PNO1Q9NRX1 252 aaKnown RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 HOMER3Q9NSC5 361 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 QPCTLQ9NXS2 382 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 OR6C3Q9NZP0 311 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 TAC3Q9UHF0 121 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 TTC7AQ9ULT0 858 aaPredicted RBP6.29□□□□□ -1.4
H3F3A-201ENST00000366813 PTGDR2Q9Y5Y4 395 aa6.29□□□□□ -1.4
H3F3A-201ENST00000366813 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 TRIM77I1YAP6 450 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 GFYI3L273 518 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 C1orf105O95561 183 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 FTCDO95954 541 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 TBXA2RP21731 343 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 JAK1P23458 1154 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 PTPN6P29350 595 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 RPA3P35244 121 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 SSR1P43307 286 aaKnown RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 ZNF140P52738 457 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 PGGT1BP53609 377 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 IRX1P78414 480 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 ABATP80404 500 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 SRYQ05066 204 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 NRF1Q16656 503 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 EIPR1Q53HC9 387 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 CXorf66Q5JRM2 361 aaPredicted RBP6.28□□□□□ -1.4
H3F3A-201ENST00000366813 KLHL24Q6TFL4 600 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 IKBIPQ70UQ0 350 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 RAB42Q8N4Z0 105 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 CNEP1R1Q8N9A8 125 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 SCCPDHQ8NBX0 429 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 KCTD6Q8NC69 237 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 LKAAEAR1Q8TD35 194 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 PROX1Q92786 737 aa6.28□□□□□ -1.4
H3F3A-201ENST00000366813 UCN3Q969E3 161 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms