RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 RSL1D1O76021 490 aaKnown RBP12.2□□□□□ -0.46
VPS29-201ENST00000360579 ACP2P11117 423 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 ATP6V1C1P21283 382 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 CD40P25942 277 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 PRKAA2P54646 552 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 DUSP5Q16690 384 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 NOXRED1Q6NXP6 359 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 TRIM46Q7Z4K8 759 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 ZAR1Q86SH2 424 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 ZNF433Q8N7K0 673 aaPredicted RBP12.2□□□□□ -0.46
VPS29-201ENST00000360579 ATP6V1C2Q8NEY4 427 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 FBXO30Q8TB52 745 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 L3HYPDHQ96EM0 354 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 GIMAP5Q96F15 307 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 KLHDC3Q9BQ90 382 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 BTBD2Q9BX70 525 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
VPS29-201ENST00000360579 ZDHHC18Q9NUE0 388 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 EMC3Q9P0I2 261 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 ICAM5Q9UMF0 924 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 FKBP7Q9Y680 259 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 ESYT3A0FGR9 886 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 RAD51DO75771 328 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
VPS29-201ENST00000360579 PRKCAP17252 672 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 PDLIM4P50479 330 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 ZNF83P51522 516 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 POU6F2P78424 691 aaPredicted RBP12.19□□□□□ -0.46
VPS29-201ENST00000360579 SRSF2Q01130 221 aaKnown RBP12.19□□□□□ -0.46
VPS29-201ENST00000360579 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 FBXW9Q5XUX1 488 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 UBE2J2Q8N2K1 259 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 RFLNBQ8N5W9 214 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 OR52N5Q8NH56 324 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 JADE3Q92613 823 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 STACQ99469 402 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 FKRPQ9H9S5 495 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 MID1IP1Q9NPA3 183 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 DUSP22Q9NRW4 184 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 ACSS1Q9NUB1 689 aaPredicted RBP12.19□□□□□ -0.46
VPS29-201ENST00000360579 CARD8Q9Y2G2 431 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 SLC25A15Q9Y619 301 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
VPS29-201ENST00000360579 A0A1W2PNR3 127 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 SLC35F4A4IF30 521 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 CCT8L1PA6NM43 557 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 GTPBP1O00178 669 aaKnown RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 SMAD9O15198 467 aaKnown RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 TCF21O43680 179 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 TBX19O60806 448 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 CRCPO75575 148 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 APEHP13798 732 aaKnown RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 NAA20P61599 178 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 CHRNEQ04844 493 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 KLHL26Q53HC5 615 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 SLC25A53Q5H9E4 307 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 CCNJQ5T5M9 372 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 C3orf33Q6P1S2 294 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 CBLN3Q6UW01 205 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 LRIG3Q6UXM1 1119 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 B3GLCTQ6Y288 498 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 IL17RELQ6ZVW7 336 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 TOR1AIP2Q8NFQ8 470 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 GPR119Q8TDV5 335 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 DCAKDQ8WVC6 231 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 ZNF75CPQ92670 426 aaPredicted RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 CIDECQ96AQ7 238 aaPredicted RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 PPCDCQ96CD2 204 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 MSI2Q96DH6 328 aaKnown RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 CHMP6Q96FZ7 201 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 ZNF300Q96RE9 604 aaPredicted RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 MYOZ1Q9NP98 299 aaPredicted RBP12.18□□□□□ -0.46
VPS29-201ENST00000360579 ASB6Q9NWX5 421 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 GIN1Q9NXP7 522 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 TMEM216Q9P0N5 145 aa12.18□□□□□ -0.46
VPS29-201ENST00000360579 VWC2LB2RUY7 222 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 C9JVG2 144 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 M0R1B8 84 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 ETV2O00321 342 aaPredicted RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 KIAA0513O60268 411 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 SEC22BO75396 215 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 DDX5P17844 614 aaKnown RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 EDNRAP25101 427 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 FRKP42685 505 aaPredicted RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 NR4A2P43354 598 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 FOXA1P55317 472 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 CSNK2A1P68400 391 aaPredicted RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 CBFBQ13951 182 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 PDK3Q15120 406 aa12.17□□□□□ -0.46
VPS29-201ENST00000360579 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
VPS29-201ENST00000360579 UBAP2Q5T6F2 1119 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms