RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 STC2O76061 302 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 CHRM4P08173 479 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 CD70P32970 193 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 OR5M10Q6IEU7 315 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 TAS1R3Q7RTX0 852 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 HPSE2Q8WWQ2 592 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 MRI1Q9BV20 369 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 MRPL22Q9NWU5 206 aaKnown RBP15.07■□□□□ 0
COL18A1-203ENST00000359759 PCGF2P35227 344 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 MELKQ14680 651 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 EBPQ15125 230 aaKnown RBP15.07■□□□□ 0
COL18A1-203ENST00000359759 TATDN3Q17R31 274 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 OR4F15Q8NGB8 312 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 NICN1Q9BSH3 213 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 SEC14L2O76054 403 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 UBL4AP11441 157 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 ZNF44P15621 663 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 PPT1P50897 306 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 DUSP7Q16829 419 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 ZNF789Q5FWF6 425 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 LIPIQ6XZB0 460 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 TPRA1Q86W33 373 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 OR4M1Q8NGD0 313 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 RTP3Q9BQQ7 232 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 RCE1Q9Y256 329 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 FAM163BP0C2L3 166 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 KITLGP21583 273 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 NME2P22392 152 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 CST6Q15828 149 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 VRK2Q86Y07 508 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 CHST14Q8NCH0 376 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 PDCD1LG2Q9BQ51 273 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 SLC19A3Q9BZV2 496 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 PITHD1Q9GZP4 211 aaPredicted RBP15.07■□□□□ 0
COL18A1-203ENST00000359759 HOXD1Q9GZZ0 328 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 METTL17Q9H7H0 456 aaPredicted RBP15.07■□□□□ 0
COL18A1-203ENST00000359759 SLC23A2Q9UGH3 650 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 MEGF11A6BM72 1044 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 EFCAB7A8K855 629 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 VIPR2P41587 438 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 VEGFCP49767 419 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 MEF2DQ14814 521 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 VASNQ6EMK4 673 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 IGSF21Q96ID5 467 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 TGIF2Q9GZN2 237 aa15.07■□□□□ 0
COL18A1-203ENST00000359759 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 CPNE7Q9UBL6 633 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ABCC6O95255 1503 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 PPLO60437 1756 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 B4DXG7 233 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 RAB27BO00194 218 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 EFNA3P52797 238 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 EMX1Q04741 257 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 EXOSC7Q15024 291 aaKnown RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 METAP1DQ6UB28 335 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 NDUFAF7Q7L592 441 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 RNF175Q8N4F7 328 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 HSD17B8Q92506 261 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ZNF75AQ96N20 296 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 KLHL42Q9P2K6 505 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 CA5BQ9Y2D0 317 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 E7ESA3 106 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 NDUFA6P56556 154 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 CNN3Q15417 329 aaKnown RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 PAPD4Q6PIY7 484 aaKnown RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 BRICD5Q6PL45 260 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 TMEM135Q86UB9 458 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SIMC1Q8NDZ2 872 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 MYH7P12883 1935 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 OR5K4A6NMS3 321 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 BET1O15155 118 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ONECUT3O60422 494 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 TNFSF8P32971 234 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 HOXA1P49639 335 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 HNRNPFP52597 415 aaKnown RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 RAB30Q15771 203 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SHEQ5VZ18 495 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SVBPQ8N300 66 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 MTMR14Q8NCE2 650 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 DMBX1Q8NFW5 382 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 OR52R1Q8NGF1 315 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 TCEAL7Q9BRU2 100 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ZNF487B1APH4 448 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 RDH16O75452 317 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ZNF28P17035 718 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SERPINF1P36955 418 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ARG2P78540 354 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SOX4Q06945 474 aaPredicted RBP15.06■□□□□ 0
COL18A1-203ENST00000359759 ILKQ13418 452 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 MITD1Q8WV92 249 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 SEC22AQ96IW7 307 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 MED20Q9H944 212 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 PGAP2Q9UHJ9 254 aa15.06■□□□□ 0
COL18A1-203ENST00000359759 ENSAO43768 121 aaKnown RBP15.05■□□□□ 0
COL18A1-203ENST00000359759 LPLP06858 475 aa15.05■□□□□ 0
COL18A1-203ENST00000359759 GLO1Q04760 184 aa15.05■□□□□ 0
COL18A1-203ENST00000359759 FAM57BQ71RH2 274 aa15.05■□□□□ 0
COL18A1-203ENST00000359759 SFXN2Q96NB2 322 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms