RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CBFBQ13951 182 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 KPNB1Q14974 876 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 NPTX1Q15818 432 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 INAQ16352 499 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 IQCCQ4KMZ1 466 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 RBM45Q8IUH3 476 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF524Q96C55 264 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 C1GALT1C1Q96EU7 318 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 TTTY12Q9BZ98 90 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 MAGIXQ9H6Y5 334 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 PTGES2Q9H7Z7 377 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 V9GYQ6 96 aa11.27□□□□□ -0.6
NIF3L1-201ENST00000359683 TLN1Q9Y490 2541 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 AP3D1O14617 1153 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 RASAL1O95294 804 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 PGCP20142 388 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 RYKP34925 604 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 DLX5P56178 289 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 HOXC5Q00444 222 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 NFATC3Q12968 1075 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 TMCO5AQ8N6Q1 288 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 TEX19Q8NA77 164 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 Q8NA96 180 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 VANGL1Q8TAA9 524 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 PHF10Q8WUB8 498 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 ZNF559Q9BR84 538 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 IL1RAPQ9NPH3 570 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 CCM2LQ9NUG4 571 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 MED17Q9NVC6 651 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 QPCTLQ9NXS2 382 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 TESQ9UGI8 421 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 ANAPC2Q9UJX6 822 aa11.27□□□□□ -0.61
NIF3L1-201ENST00000359683 A0A087WZY1 265 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 DHRS12A0PJE2 317 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 GMFGO60234 142 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ZIC3O60481 467 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SEMA7AO75326 666 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 IFNW1P05000 195 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 HOXB6P17509 224 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 DPP4P27487 766 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 HTR2AP28223 471 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SRD5A2P31213 254 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 RFC3P40938 356 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 IDH2P48735 452 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ERFP50548 548 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 CCR4P51679 360 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 PPIAP62937 165 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 CHRNB3Q05901 458 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 KLRB1Q12918 225 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 QPRTQ15274 297 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 TOMM34Q15785 309 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 RNFT1Q5M7Z0 435 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ARSKQ6UWY0 536 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 PIWIL3Q7Z3Z3 882 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 RANBP3LQ86VV4 465 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SLC22A16Q86VW1 577 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 TMEM251Q8N6I4 163 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 PAPD5Q8NDF8 572 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 DTNBP1Q96EV8 351 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 SLC47A1Q96FL8 570 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 TAAR6Q96RI8 345 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 MCHR1Q99705 422 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 TRIM2Q9C040 744 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 NDUFAF4Q9P032 175 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 B4GALT7Q9UBV7 327 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 ENPP4Q9Y6X5 453 aa11.26□□□□□ -0.61
NIF3L1-201ENST00000359683 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 CDC40O60508 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 NUDT14O95848 222 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 HPNP05981 417 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 RAP2AP10114 183 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 UQCRBP14927 111 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 MST1P26927 711 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 MAGEA2P43356 314 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 SESN3P58005 492 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 VLDLRP98155 873 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 PMP22Q01453 160 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 OR1Q1Q15612 314 aa11.25□□□□□ -0.61
NIF3L1-201ENST00000359683 TMEM44Q2T9K0 475 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms