RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FER1L6-AS2Q96M78 137 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 ANKRD60Q9BZ19 345 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 FAM118AQ9NWS6 357 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 KLRF1Q9NZS2 232 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 C17orf51A8MQB3 221 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 NTN1O95631 604 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 GNAO1P09471 354 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 IFNGR2P38484 337 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 IDH2P48735 452 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 ST13P50502 369 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 C17orf67Q0P5P2 114 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 FOXC1Q12948 553 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 SWT1Q5T5J6 900 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 TTC23Q5W5X9 447 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 C1orf94Q6P1W5 598 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 WDR88Q6ZMY6 472 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ZER1Q7Z7L7 766 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 CHERPQ8IWX8 916 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 MARVELD2Q8N4S9 558 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ZNF555Q8NEP9 628 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 DNAJA4Q8WW22 397 aaPredicted RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 PSMF1Q92530 271 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 MPP4Q96JB8 637 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 DGCR6LQ9BY27 220 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 METTL7AQ9H8H3 244 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 GALNT9Q9HCQ5 603 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ATP13A2Q9NQ11 1180 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 SELENONQ9NZV5 590 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 KLK13Q9UKR3 277 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ICAM5Q9UMF0 924 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 CFAP47Q6ZTR5 3102 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ITPKBP27987 946 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 POLR2IP36954 125 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 P2RX1P51575 399 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 GAS1P54826 345 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 NPRL3Q12980 569 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 AIMP2Q13155 320 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 TBC1D25Q3MII6 688 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ACER2Q5QJU3 275 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 B3GNTL1Q67FW5 361 aaPredicted RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 BICRALQ6AI39 1079 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 WBP2NLQ6ICG8 309 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 MBOAT2Q6ZWT7 520 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 PARP8Q8N3A8 854 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 CLEC1AQ8NC01 280 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 OR5W2Q8NH69 310 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 B4GALNT2Q8NHY0 566 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 TMEM239Q8WW34 195 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 SECISBP2Q96T21 854 aaKnown RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 GABARAPL3Q9BY60 117 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 HPF1Q9NWY4 346 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 ENOPH1Q9UHY7 261 aa14.25□□□□□ -0.13
CTSA-202ENST00000354880 CHCHD2Q9Y6H1 151 aaPredicted RBP14.25□□□□□ -0.13
CTSA-202ENST00000354880 LOC100130705A0A1B0GUX0 176 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 SLC16A6O15403 523 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 GMFGO60234 142 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 CLIC3O95833 236 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 NUDT14O95848 222 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 PGCP20142 388 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 CASP3P42574 277 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 RPP38P78345 283 aaKnown RBP14.24□□□□□ -0.13
CTSA-202ENST00000354880 CBFBQ13951 182 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 PDK3Q15120 406 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 MEP1AQ16819 746 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 KLHL17Q6TDP4 642 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 USP51Q70EK9 711 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 NRMQ8IXM6 262 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 RNF113BQ8IZP6 322 aaKnown RBP14.24□□□□□ -0.13
CTSA-202ENST00000354880 ZNF563Q8TA94 476 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 PIGXQ8TBF5 258 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 C3orf49Q96BT1 292 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 HS6ST2Q96MM7 605 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 UCK2Q9BZX2 261 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 GRIP2Q9C0E4 1043 aa14.24□□□□□ -0.13
CTSA-202ENST00000354880 C2orf72A6NCS6 295 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 RPSAP08865 295 aaKnown RBP14.23□□□□□ -0.13
CTSA-202ENST00000354880 MYF6P23409 242 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 ITGA3P26006 1051 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 PTGDSP41222 190 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 SLC1A3P43003 542 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 OMPP47874 163 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 COX10Q12887 443 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 SRSF6Q13247 344 aaKnown RBP14.23□□□□□ -0.13
CTSA-202ENST00000354880 SNTA1Q13424 505 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 COL28A1Q2UY09 1125 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 ATP1A1-AS1Q5TC04 95 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 TMEM81Q6P7N7 255 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 PRICKLE2Q7Z3G6 844 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 KLHDC3Q9BQ90 382 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 ZNF426Q9BUY5 554 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 LHPPQ9H008 270 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 KRCC1Q9NPI7 259 aaPredicted RBP14.23□□□□□ -0.13
CTSA-202ENST00000354880 SDHAF3Q9NRP4 125 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 TEKT2Q9UIF3 430 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 WIF1Q9Y5W5 379 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 PCNX3Q9H6A9 2034 aa14.23□□□□□ -0.13
CTSA-202ENST00000354880 PTNP21246 168 aa14.22□□□□□ -0.13
CTSA-202ENST00000354880 MST1P26927 711 aa14.22□□□□□ -0.13
CTSA-202ENST00000354880 EPHA2P29317 976 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms