RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.74□□□□□ -1.653e-12■■■■□ 26.6
SKP1-202ENST00000353411 ALX4Q9H161 411 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 SUV39H2Q9H5I1 410 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 BACE2Q9Y5Z0 518 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 GPX5O75715 221 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FABP4P15090 132 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ST8SIA6P61647 398 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 IL10RBQ08334 325 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RPE65Q16518 533 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 GGNBP1Q5YKI7 109 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 OR52W1Q6IF63 320 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 POMZP3Q6PJE2 187 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FAM151BQ6UXP7 276 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RD3Q7Z3Z2 195 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 MCEMP1Q8IX19 187 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 BBS10Q8TAM1 723 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FAM151AQ8WW52 585 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 WFIKKN1Q96NZ8 548 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 NSUN5Q96P11 429 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 CNN2Q99439 309 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 SHARPINQ9H0F6 387 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FN3KRPQ9HA64 309 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 MED17Q9NVC6 651 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 LRP6O75581 1613 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TIAM2Q8IVF5 1701 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 MYOFQ9NZM1 2061 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 OR5H14A6NHG9 310 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DBX1A6NMT0 343 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PPM1DO15297 605 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 HCRTR2O43614 444 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CELF2O95319 508 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 PRF1P14222 555 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CDK5Q00535 292 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ABRAXAS2Q15018 415 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ACSM3Q53FZ2 586 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 AFMIDQ63HM1 303 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SH2D5Q6ZV89 423 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RIMKLAQ8IXN7 391 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RGL4Q8IZJ4 473 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TRAM1L1Q8N609 369 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PROKR1Q8TCW9 393 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ADIPOR1Q96A54 375 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TAF9BQ9HBM6 251 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TAS2R5Q9NYW4 299 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 KCMF1Q9P0J7 381 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PHF3Q92576 2039 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 A0A0B4J2A0 478 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SRPX2O60687 465 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 EIF3GO75821 320 aaKnown RBP eCLIP4.74□□□□□ -1.65
SKP1-202ENST00000353411 IL5P05113 134 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SFTA3P0C7M3 94 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FDXRP22570 491 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 HOXC13P31276 330 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 BDKRB1P46663 353 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 EPHA4P54764 986 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RPS13P62277 151 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 RPS25P62851 125 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZNF763Q0D2J5 394 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SLC10A2Q12908 348 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 ILKQ13418 452 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 RPL22L1Q6P5R6 122 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 SPRYD4Q8WW59 207 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 HPSE2Q8WWQ2 592 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZNF516Q92618 1163 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ESAMQ96AP7 390 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TOE1Q96GM8 510 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 POLDIP3Q9BY77 421 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 CERS4Q9HA82 394 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 FBXL12Q9NXK8 326 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SHPKQ9UHJ6 478 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CFHP08603 1231 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PBX2P40425 430 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 GRK6P43250 576 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DGKEP52429 567 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ARHGAP11BQ3KRB8 267 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 DNM1P34Q6PK57 102 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 MOB1BQ7L9L4 216 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 KIAA0907Q7Z7F0 614 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 DUSP19Q8WTR2 217 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMEM174Q8WUU8 243 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CCDC74BQ96LY2 380 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 UCN2Q96RP3 112 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ESRP2Q9H6T0 727 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 CHRNA9Q9UGM1 479 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PCTPQ9UKL6 214 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 TMEM14AQ9Y6G1 99 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 SLCO1B1Q9Y6L6 691 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 MCM3APO60318 1980 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 A0A1B0GTQ1 180 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ZNF878C9JN71 531 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 H7BY64 318 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CYB5BO43169 146 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 ERAL1O75616 437 aaKnown RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 NFYBP25208 207 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 CRABP1P29762 137 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 PBLDP30039 288 aaPredicted RBP4.74□□□□□ -1.65
SKP1-202ENST00000353411 CD80P33681 288 aa4.74□□□□□ -1.65
SKP1-202ENST00000353411 GABRA2P47869 451 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms