RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CSTAP01040 98 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 IGHA1P01876 353 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 FUT1P19526 365 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 ALAS2P22557 587 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 ATP1A4Q13733 1029 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 OR2G6Q5TZ20 316 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 QSOX2Q6ZRP7 698 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 MEPCEQ7L2J0 689 aaKnown RBP15.38■□□□□ 0.05
SAMM50-201ENST00000350028 TMEM151BQ8IW70 566 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 OR13C2Q8NGS9 318 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 SENP5Q96HI0 755 aaPredicted RBP15.38■□□□□ 0.05
SAMM50-201ENST00000350028 ARHGAP9Q9BRR9 750 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 IFT27Q9BW83 186 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 MROQ9BYG7 248 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 NUAK2Q9H093 628 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 CMC2Q9NRP2 79 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 TNFRSF10DQ9UBN6 386 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 SLC35A3Q9Y2D2 325 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 BDP1A6H8Y1 2624 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 EML5Q05BV3 1969 aa15.38■□□□□ 0.05
SAMM50-201ENST00000350028 MN1Q10571 1320 aaPredicted RBP15.38■□□□□ 0.05
SAMM50-201ENST00000350028 SAGE2PA6NJ88 616 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 WWP2O00308 870 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SOCS6O14544 535 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 POLR1CO15160 346 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ADAM11O75078 769 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ATP6V1E1P36543 226 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PPICP45877 212 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 GPR143P51810 404 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 CFHR1Q03591 330 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PLK5Q496M5 336 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SHFQ7M4L6 423 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PRSS42Q7Z5A4 293 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 GPR135Q8IZ08 494 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 KLHL36Q8N4N3 616 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 BBS1Q8NFJ9 593 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 OR4F15Q8NGB8 312 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 OR52N1Q8NH53 320 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 OR1L3Q8NH93 324 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PTPMT1Q8WUK0 201 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 GATAD2BQ8WXI9 593 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 UFD1Q92890 307 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SLC41A2Q96JW4 573 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SLC46A1Q96NT5 459 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 NDC1Q9BTX1 674 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ENKD1Q9H0I2 346 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PNO1Q9NRX1 252 aaKnown RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SIT1Q9Y3P8 196 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SPTBP11277 2137 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SPAG17Q6Q759 2223 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PNMA8CA0A1B0GUJ8 204 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 RFPL3O75679 317 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 MSL3P1P0C860 447 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 GIMD1P0DJR0 217 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ADH7P40394 386 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 OR1D4P47884 311 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SLC37A1P57057 533 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 FOXK2Q01167 660 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ACSM1Q08AH1 577 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 NNATQ16517 81 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 TRIM16LQ309B1 348 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 KLHL26Q53HC5 615 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 YOD1Q5VVQ6 348 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 NIPAL3Q6P499 406 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 PLBD1Q6P4A8 553 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 KIRREL2Q6UWL6 708 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 RTL4Q6ZR62 310 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 LHFPL3Q86UP9 236 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SLITRK4Q8IW52 837 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 CADM2Q8N3J6 435 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ZNF485Q8NCK3 441 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 OR4C3Q8NH37 302 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 DNAJA4Q8WW22 397 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 TM9SF4Q92544 642 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 NECAB3Q96P71 396 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 CCNL2Q96S94 520 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 IER2Q9BTL4 223 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 MKKSQ9NPJ1 570 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-201ENST00000350028 DAPK2Q9UIK4 370 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 SERTAD3Q9UJW9 196 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 ICAM5Q9UMF0 924 aa15.37■□□□□ 0.05
SAMM50-201ENST00000350028 IGKV3D-11A0A0A0MRZ8 115 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 PRR23D1E9PI22 279 aaPredicted RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 SLC30A4O14863 429 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 PRR23D2P0DMB1 279 aaPredicted RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 SLC6A6P31641 620 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 RORAP35398 523 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 RPS19P39019 145 aaKnown RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ETV6P41212 452 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 RORCP51449 518 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 IFITM3Q01628 133 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 OXA1LQ15070 435 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 SNAP47Q5SQN1 464 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 WDR74Q6RFH5 385 aaPredicted RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 THSD4Q6ZMP0 1018 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 OAFQ86UD1 273 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 UBALD2Q8IYN6 164 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 Q8N9G6 341 aaPredicted RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ZNF527Q8NB42 609 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ZSCAN1Q8NBB4 408 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms