RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ABHD4Q8TB40 342 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 NDUFB11Q9NX14 153 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 TSPAN11A1L157 253 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 BPNT1O95861 308 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 BPIFB2Q8N4F0 458 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 LGALS14Q8TCE9 139 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 RNF215Q9Y6U7 377 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 CHD4Q14839 1912 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 HMGN2P05204 90 aaKnown RBP16.96■□□□□ 0.31
SMC4-201ENST00000344722 GJA1P17302 382 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 AOAHP28039 575 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 TRA2BP62995 288 aaKnown RBP16.96■□□□□ 0.31
SMC4-201ENST00000344722 ZNF680Q8NEM1 530 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 MAP6Q96JE9 813 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 NECTIN4Q96NY8 510 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 EVA1AQ9H8M9 152 aa16.96■□□□□ 0.31
SMC4-201ENST00000344722 ANTXRLA6NF34 631 aa16.96■□□□□ 0.3
SMC4-201ENST00000344722 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.3
SMC4-201ENST00000344722 PIM1P11309 404 aaPredicted RBP16.96■□□□□ 0.3
SMC4-201ENST00000344722 ZNF41P51814 821 aaPredicted RBP16.96■□□□□ 0.3
SMC4-201ENST00000344722 AFF3P51826 1226 aaKnown RBP16.96■□□□□ 0.3
SMC4-201ENST00000344722 DUSP7Q16829 419 aa16.96■□□□□ 0.3
SMC4-201ENST00000344722 PAN3Q58A45 887 aaKnown RBP16.96■□□□□ 0.3
SMC4-201ENST00000344722 SSX9Q7RTT3 188 aa16.96■□□□□ 0.3
SMC4-201ENST00000344722 LAS2Q8IYD9 372 aa16.96■□□□□ 0.3
SMC4-201ENST00000344722 ASB11Q8WXH4 323 aa16.96■□□□□ 0.3
SMC4-201ENST00000344722 SLC2A5P22732 501 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 ELAVL4P26378 380 aaKnown RBP16.95■□□□□ 0.3
SMC4-201ENST00000344722 GPR50Q13585 617 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 ZNF280BQ86YH2 543 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 APCDD1Q8J025 514 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 ANKRD53Q8N9V6 530 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 PAAF1Q9BRP4 392 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 PITHD1Q9GZP4 211 aaPredicted RBP16.95■□□□□ 0.3
SMC4-201ENST00000344722 KLRF1Q9NZS2 232 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 M0QZQ0 153 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 SPNP16150 400 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 EMP3P54852 163 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 C16orf58Q96GQ5 468 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 SPIN2AQ99865 258 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 SPIN2BQ9BPZ2 258 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 OR1A2Q9Y585 309 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 BACE2Q9Y5Z0 518 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 PAPD4Q6PIY7 484 aaKnown RBP16.95■□□□□ 0.3
SMC4-201ENST00000344722 BEND4Q6ZU67 534 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 KIF25Q9UIL4 384 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
SMC4-201ENST00000344722 TMEM129A0AVI4 362 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 DCDC2BA2VCK2 349 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 TNFP01375 233 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 MC3RP41968 323 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 CCL14Q16627 93 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 PRRT3Q5FWE3 981 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 B3GLCTQ6Y288 498 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 MAMDC2Q7Z304 686 aaPredicted RBP16.95■□□□□ 0.3
SMC4-201ENST00000344722 PLSCR3Q9NRY6 295 aa16.95■□□□□ 0.3
SMC4-201ENST00000344722 PGCP20142 388 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 HTR1FP30939 366 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 CCR7P32248 378 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 TGFBR1P36897 503 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 AANATQ16613 207 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 C3orf33Q6P1S2 294 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 NAXEQ8NCW5 288 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 IRF7Q92985 503 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 PGAM5Q96HS1 289 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 BTBD2Q9BX70 525 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 INIPQ9NRY2 104 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 SLC22A23A1A5C7 686 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 D6RAR5 112 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 SIX6O95475 246 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 ERN2Q76MJ5 926 aaKnown RBP16.94■□□□□ 0.3
SMC4-201ENST00000344722 NLGN4XQ8N0W4 816 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 CDRT4Q8N9R6 151 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 RAB7BQ96AH8 199 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 GIMAP5Q96F15 307 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 CRB3Q9BUF7 120 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 NIT2Q9NQR4 276 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 GALTP07902 379 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 CAV2P51636 162 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 SLC22A8Q8TCC7 542 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 A0A0A6YYJ9 748 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 NPIPB15A6NHN6 443 aaPredicted RBP16.94■□□□□ 0.3
SMC4-201ENST00000344722 BATFQ16520 125 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 SYPL1Q16563 259 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 USP51Q70EK9 711 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 OR2M4Q96R27 311 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 MYADMQ96S97 322 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 SPNS1Q9H2V7 528 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 TMEM38AQ9H6F2 299 aa16.94■□□□□ 0.3
SMC4-201ENST00000344722 ZNF223Q9UK11 482 aaPredicted RBP16.94■□□□□ 0.3
SMC4-201ENST00000344722 ATP1B1P05026 303 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 ZDHHC11BP0C7U3 371 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 LIPCP11150 499 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms