RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TRUB1Q8WWH5 349 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 BORCS8Q96FH0 119 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 MSLNLQ96KJ4 702 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 AMDHD1Q96NU7 426 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 FBXO9Q9UK97 447 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 TSC22D4Q9Y3Q8 395 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 FRS3O43559 492 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 MRPL33O75394 65 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 UTS2O95399 124 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 GNG2P59768 71 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 PCBD1P61457 104 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 GPR139Q6DWJ6 353 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 PLBD1Q6P4A8 553 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 FAM199XQ6PEV8 388 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 SLC22A16Q86VW1 577 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 DAPP1Q9UN19 280 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 OR51B4Q9Y5P0 310 aa15.27■□□□□ 0.04
SMARCA4-201ENST00000344626 DPP4P27487 766 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 THBS2P35442 1172 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 MAGEA12P43365 314 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 SOX2P48431 317 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 MZT1Q08AG7 82 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 TMEM176BQ3YBM2 270 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 PMS2CLQ68D20 193 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 OR13C3Q8NGS6 347 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 KLHL15Q96M94 604 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 DUSP15Q9H1R2 295 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 NKX1-2Q9UD57 310 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 ATG4BQ9Y4P1 393 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 WIF1Q9Y5W5 379 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 LOC102725191A0A1B0GVB3 256 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 WBP4O75554 376 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 PRKRAO75569 313 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 ENTPD8Q5MY95 495 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF565Q8N9K5 539 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 SGPP1Q9BX95 441 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 DCSTAMPQ9H295 470 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 ARMC1Q9NVT9 282 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 RNF6Q9Y252 685 aa15.27■□□□□ 0.03
SMARCA4-201ENST00000344626 CLDN25C9JDP6 229 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 TNFRSF21O75509 655 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 PYCR1P32322 319 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC35A1P78382 337 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MED25Q71SY5 747 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CMIPQ8IY22 773 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 WDR20Q8TBZ3 569 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 URM1Q9BTM9 101 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 TRBV2A0A0J9YWF9 115 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 OR6C76A6NM76 312 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CCRL2O00421 344 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 IGHG1P01857 330 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CELP19835 753 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MRPL2Q5T653 305 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 KIAA1217Q5T5P2 1943 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MUC6Q6W4X9 2439 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 LOC105369274A0A096LPK9 316 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 A0A1B0GTQ1 180 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 SLC43A1O75387 559 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CDRT1O95170 752 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 AZGP1P25311 298 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MTNR1AP48039 350 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 FAM71E1Q6IPT2 247 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 LRRN1Q6UXK5 716 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CBLL1Q75N03 491 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 OR4N4Q8N0Y3 316 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 GLIPR2Q9H4G4 154 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 FAM118AQ9NWS6 357 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 MEMO1Q9Y316 297 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 PPM1DO15297 605 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 HRGP04196 525 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 SSTR4P31391 388 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CXADRP78310 365 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 C3P1Q6ZMU1 363 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 TSPYL5Q86VY4 417 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 ZNF675Q8TD23 568 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 CCDC107Q8WV48 283 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 ASIC5Q9NY37 505 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 LRFN1Q9P244 771 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 POMT2Q9UKY4 750 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 PLEKHA6Q9Y2H5 1048 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 IER3IP1Q9Y5U9 82 aa15.26■□□□□ 0.03
SMARCA4-201ENST00000344626 ALDOCP09972 364 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 BMP4P12644 408 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 ARMC10Q8N2F6 343 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 CNIH4Q9P003 139 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 EBF1Q9UH73 591 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 CNOT11Q9UKZ1 510 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 TNFSF4P23510 183 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 TACR1P25103 407 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 TRHRP34981 398 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 LTBRP36941 435 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 C6orf141Q5SZD1 244 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 RNF113BQ8IZP6 322 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 ADAMTS16Q8TE57 1224 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 TREX2Q9BQ50 279 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 DEFB127Q9H1M4 99 aa15.25■□□□□ 0.03
SMARCA4-201ENST00000344626 GRIP1Q9Y3R0 1128 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms