RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C11orf54Q9H0W9 315 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-202ENST00000343765 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
VIPAS39-202ENST00000343765 PCDHGB2Q9Y5G2 931 aa13.77□□□□□ -0.21
VIPAS39-202ENST00000343765 KIR2DS5A0A0G2JLQ3 304 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 A0A0G2JNG1 304 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 KIR2DS3K7RE56 304 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 POLR1CO15160 346 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 PRKNO60260 465 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 RCBTB2O95199 551 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 PSG6Q00889 435 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 GPR50Q13585 617 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM53BQ14153 422 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 KIR2DS5Q14953 304 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 RNF113BQ8IZP6 322 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 DEFB119Q8N690 84 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 ZDHHC1Q8WTX9 485 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 CTHRC1Q96CG8 243 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 TGFBR3LH3BV60 316 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 NGFRP08138 427 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 PGDP52209 483 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 STX4Q12846 297 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 CRMP1Q14194 572 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 P2RY14Q15391 338 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 GARNL3Q5VVW2 1013 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 ARL9Q6T311 187 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 OAFQ86UD1 273 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 RAB43Q86YS6 212 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 GHDCQ8N2G8 530 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 LNX2Q8N448 690 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 KISS1RQ969F8 398 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 ATF6BQ99941 703 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 FOLH1BQ9HBA9 442 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 PRDM9Q9NQV7 894 aa13.76□□□□□ -0.21
VIPAS39-202ENST00000343765 SPTY2D1-AS1A0A0U1RR47 76 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 E9PI62 339 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 J3QRE1 110 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RNF13O43567 381 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC35E2P0CK97 266 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 IL9P15248 144 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 MAP3K8P41279 467 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 HTR3AP46098 478 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 IL18Q14116 193 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM27D1Q5T7N8 215 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 DTX3Q8N9I9 347 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM181AQ8N9Y4 354 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 DNAJA4Q8WW22 397 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RIT1Q92963 219 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SPACA7Q96KW9 195 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF559Q9BR84 538 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 CMC2Q9NRP2 79 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 C2orf42Q9NWW7 574 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 TTC36A6NLP5 189 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RIIAD1A6NNX1 92 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 C2CD4DB7Z1M9 353 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 GTPBP1O00178 669 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 NKX2-2O95096 273 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 AK1P00568 194 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC3A1Q07837 685 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 CRYZQ08257 329 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNHIT3Q15649 155 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 ALG10BQ5I7T1 473 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 KIAA0895LQ68EN5 471 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 ZCCHC12Q6PEW1 402 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RPTNQ6XPR3 784 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 MCATQ8IVS2 390 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC44A3Q8N4M1 653 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 C19orf47Q8N9M1 422 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 OR4C6Q8NH72 309 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 CAPSLQ8WWF8 208 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RBM18Q96H35 190 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 TIMP4Q99727 224 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 HOXD1Q9GZZ0 328 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 SEMA6CQ9H3T2 930 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 POMT2Q9UKY4 750 aa13.75□□□□□ -0.21
VIPAS39-202ENST00000343765 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 A0A0B4J2E0 115 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 A0A1B0GX12 115 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 COQ9O75208 318 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 KRT8P05787 483 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 CHRNB1P11230 501 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 PPP3R1P63098 170 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 BTG2P78543 158 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 CCINQ13939 588 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF267Q14586 743 aaPredicted RBP13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 ZNF544Q6NX49 715 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 TMPRSS11FQ6ZWK6 438 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 PARGQ86W56 976 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 GDPD1Q8N9F7 314 aa13.74□□□□□ -0.21
VIPAS39-202ENST00000343765 OR51L1Q8NGJ5 315 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms