RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 GLI4P10075 376 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 COX4I1P13073 169 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 UQCRBP14927 111 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ETS2P15036 469 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ME2P23368 584 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ELK4P28324 431 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NUP107P57740 925 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RBBP4Q09028 425 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 FOXF1Q12946 379 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ART3Q13508 389 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SCARB2Q14108 478 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 QPRTQ15274 297 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CDSNQ15517 529 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NSUN5P2Q63ZY6 315 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NANOGP8Q6NSW7 305 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NCCRP1Q6ZVX7 275 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 PIGWQ7Z7B1 504 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 LACC1Q8IV20 430 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 UBQLNLQ8IYU4 475 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 C10orf111Q8N326 155 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RPRMLQ8N4K4 120 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 MARVELD2Q8N4S9 558 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 POU5F2Q8N7G0 328 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 C11orf65Q8NCR3 313 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 OR8J3Q8NGG0 315 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 OR10Q1Q8NGQ4 319 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ST8SIA1Q92185 356 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SMPDL3BQ92485 455 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RCN3Q96D15 328 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 MRGPRX4Q96LA9 322 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TRIB1Q96RU8 372 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SPATA5L1Q9BVQ7 753 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 MYLK2Q9H1R3 596 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NANOGQ9H9S0 305 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ANGPT4Q9Y264 503 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF443Q9Y2A4 671 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ITPR2Q14571 2701 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TEX15Q9BXT5 2789 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 MED12Q93074 2177 aa13.92□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CD8B2A6NJW9 211 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CLDN24A6NM45 220 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 FXYD1O00168 92 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SEC14L5O43304 696 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 DNAJA2O60884 412 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 PRKCAP17252 672 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 PSMA4P25789 261 aaKnown RBP13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RYKP34925 604 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RPS3AP61247 264 aaKnown RBP13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RAC1P63000 192 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SELPLGQ14242 412 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF311Q5JNZ3 666 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RNF220Q5VTB9 566 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF836Q6ZNA1 936 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SERPINA11Q86U17 422 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 VRK2Q86Y07 508 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SLC30A8Q8IWU4 369 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 FBXO27Q8NI29 283 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF563Q8TA94 476 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 POC1BQ8TC44 478 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ASB5Q8WWX0 329 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CNOT9Q92600 299 aaKnown RBP13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SDCCAG3Q96C92 435 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ZNF607Q96SK3 696 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ECSITQ9BQ95 431 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SLC39A3Q9BRY0 314 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SPATA9Q9BWV2 254 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TRIM8Q9BZR9 551 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 KAT8Q9H7Z6 458 aaKnown RBP13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CALHM2Q9HA72 323 aa13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 DNAJB12Q9NXW2 375 aaKnown RBP13.91□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CDHR4A6H8M9 788 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 GJE1A6NN92 205 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CLCA1A8K7I4 914 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 AIM2O14862 343 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SERPINB7O75635 380 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 DCTN3O75935 186 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 IL2RAP01589 272 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 PABPC4LP0CB38 370 aaKnown RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 GRNP28799 593 aaKnown RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 PRDX6P30041 224 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TIMP3P35625 211 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 EEF1A1P68104 462 aaKnown RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TOMM34Q15785 309 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ADRM1Q16186 407 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 SLC25A53Q5H9E4 307 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 NET1Q7Z628 596 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 ARPINQ7Z6K5 226 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 TREML1Q86YW5 311 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 OR10A6Q8NH74 314 aa13.9□□□□□ -0.18
TNFRSF12A-202ENST00000341627 CA5BP1Q8WTZ4 195 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms