RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 M0QX08 132 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 M0R3H8 397 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 GSTA4O15217 222 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 GCM2O75603 506 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 UBOX5O94941 541 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 AGFG2O95081 481 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 SHC1P29353 583 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 PCGF2P35227 344 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 GCKP35557 465 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 GFRA1P56159 465 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 CLDN20P56880 219 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 EEF1A1P68104 462 aaKnown RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 KCNC4Q03721 635 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 RINLQ6ZS11 566 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 TRPM8Q7Z2W7 1104 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 CALHM3Q86XJ0 350 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 DEFB107AQ8IZN7 70 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 NSL1Q96IY1 281 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 ZNF607Q96SK3 696 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 KCTD14Q9BQ13 255 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 PIGQQ9BRB3 760 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 SUCOQ9UBS9 1254 aaKnown RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 ZNF232Q9UNY5 417 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 GPC6Q9Y625 555 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 V9GYQ6 96 aa11.94□□□□□ -0.5
TUBD1-202ENST00000340993 SPTAN1Q13813 2472 aaKnown RBP11.94□□□□□ -0.5
TUBD1-202ENST00000340993 DOCK7Q96N67 2140 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 CDHR4A6H8M9 788 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 FAM220BPB1ANY3 271 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 EIF1AYO14602 144 aaKnown RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 EIF4E2O60573 245 aaKnown RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 NPPAP01160 153 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 MSX1P28360 303 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 MAGEA8P43361 318 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 GSK3BP49841 420 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 LHX2P50458 406 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 SESN3P58005 492 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 MERTKQ12866 999 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 GANABQ14697 944 aaKnown RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 VASNQ6EMK4 673 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 AAGABQ6PD74 315 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 RPTNQ6XPR3 784 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 NET1Q7Z628 596 aaPredicted RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 TAMM41Q96BW9 452 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 HOPXQ9BPY8 73 aaPredicted RBP11.93□□□□□ -0.5
TUBD1-202ENST00000340993 ALG2Q9H553 416 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 SLC13A4Q9UKG4 626 aa11.93□□□□□ -0.5
TUBD1-202ENST00000340993 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 A0A1B0GVC2 190 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CFAP73A6NFT4 308 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 TNFSF11O14788 317 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ZG16O60844 167 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 EPPINO95925 133 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 PRKCAP17252 672 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 PGCP20142 388 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CA7P43166 264 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 SUCLG1P53597 346 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 SRSF1Q07955 248 aaKnown RBP eCLIP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 KRT72Q14CN4 511 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 DUSP7Q16829 419 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 MICU2Q8IYU8 434 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 RBM15BQ8NDT2 890 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ZNF845Q96IR2 970 aaPredicted RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 TPD52L3Q96J77 140 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CDRT15Q96T59 188 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 BCL2L10Q9HD36 194 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 SPAG4Q9NPE6 437 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ZNF835Q9Y2P0 537 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 IFT52Q9Y366 437 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ELOVL7A1L3X0 281 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 BCKDKO14874 412 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 STSP08842 583 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 GP1BBP13224 206 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 EIF1AXP47813 144 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 AGFG1P52594 562 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CRYBA2P53672 197 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 PMPCAQ10713 525 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 BNIP2Q12982 314 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 C8orf82Q6P1X6 216 aaPredicted RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ENPP6Q6UWR7 440 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ARPINQ7Z6K5 226 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 RBM45Q8IUH3 476 aaKnown RBP11.92□□□□□ -0.5
TUBD1-202ENST00000340993 LACC1Q8IV20 430 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 FAM71CQ8NEG0 241 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CCDC120Q96HB5 630 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 TUBA1CQ9BQE3 449 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 SPATA9Q9BWV2 254 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 GMEB1Q9Y692 573 aa11.92□□□□□ -0.5
TUBD1-202ENST00000340993 CACNA1CQ13936 2221 aa11.91□□□□□ -0.5
TUBD1-202ENST00000340993 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
TUBD1-202ENST00000340993 A0A1W2PNR3 127 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms