RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SLC35A3Q9Y2D2 325 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 USH1CQ9Y6N9 552 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 PCNX3Q9H6A9 2034 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 NPIPA5A0A0B4J1W7 369 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 A6NNC1 897 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 SHISA8B8ZZ34 492 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 NPIPA7E9PJI5 369 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 RFXANKO14593 260 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF195O14628 629 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 FCMRO60667 390 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 DNAJA2O60884 412 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 UGT2B17O75795 530 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 SYNGR4O95473 234 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 KRT75O95678 551 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 NPIPA8P0DM63 369 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR12D1P0DN82 309 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 IL12AP29459 219 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 KIR2DL2P43627 348 aaPredicted RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 NME5P56597 212 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 FOXF1Q12946 379 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 SELENBP1Q13228 472 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 GPR68Q15743 365 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 CTU2Q2VPK5 515 aaKnown RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 SLC25A53Q5H9E4 307 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 HBMQ6B0K9 141 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 TNFAIP8L2Q6P589 184 aaPredicted RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 CBLN3Q6UW01 205 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 FAM214BQ7L5A3 538 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 LILRA2Q8N149 483 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 CLEC4FQ8N1N0 589 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF619Q8N2I2 560 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 TMCO5AQ8N6Q1 288 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 POC1BQ8TC44 478 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 XAGE5Q8WWM1 108 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 TMEM234Q8WY98 164 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 ST8SIA1Q92185 356 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 CPNE4Q96A23 557 aaPredicted RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 ROPN1LQ96C74 230 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 GMPPAQ96IJ6 420 aaPredicted RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF845Q96IR2 970 aaPredicted RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 TRNT1Q96Q11 434 aaKnown RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 FANCFQ9NPI8 374 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 RASSF1Q9NS23 344 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 DNAJB12Q9NXW2 375 aaKnown RBP11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 NDRG3Q9UGV2 375 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 MKLN1Q9UL63 735 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 EMC9Q9Y3B6 208 aa11.97□□□□□ -0.49
SIRPB3P-201ENST00000340424 POLQO75417 2590 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 HMGN4O00479 90 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 SS18L1O75177 396 aaPredicted RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 NTN1O95631 604 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 FAM107AO95990 144 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 PLGP00747 810 aaPredicted RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 CSTAP01040 98 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZCCHC18P0CG32 403 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 PRKCAP17252 672 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 PGCP20142 388 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 IL11P20809 199 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 MRPL19P49406 292 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 CARD18P57730 90 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 SKP2Q13309 424 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 TYW3Q6IPR3 259 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 EPGNQ6UW88 154 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 PLXDC2Q6UX71 529 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF621Q6ZSS3 439 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 RNF130Q86XS8 419 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 CMIPQ8IY22 773 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 MIER2Q8N344 545 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR6K3Q8NGY3 331 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 FBXO27Q8NI29 283 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 DYDC1Q8WWB3 177 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 NINJ1Q92982 152 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 REXO5Q96IC2 774 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 ITCHQ96J02 903 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 POLDIP3Q9BY77 421 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 CLEC4MQ9H2X3 399 aaPredicted RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 GP6Q9HCN6 339 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 EXOSC3Q9NQT5 275 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 TMEM45AQ9NWC5 275 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 THUMPD1Q9NXG2 353 aaKnown RBP11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 PROCRQ9UNN8 238 aa11.96□□□□□ -0.49
SIRPB3P-201ENST00000340424 A0A0J9YW62 118 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 TNFSF11O14788 317 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 DIAPH2O60879 1101 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 SMNDC1O75940 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 AQP8O94778 261 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 CGAP01215 116 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 FKBP2P26885 142 aaKnown RBP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 CPOXP36551 454 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 CD79BP40259 229 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC6A8P48029 635 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCR4P51679 360 aa11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 POLR2JP52435 117 aaKnown RBP11.95□□□□□ -0.5
SIRPB3P-201ENST00000340424 CTBP2P56545 445 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms