RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PGM3O95394 542 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 PRKCAP17252 672 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 AGAP20933 346 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 EIF1P41567 113 aaKnown RBP13.75□□□□□ -0.21
UBE3B-201ENST00000340074 CLDN15P56746 228 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 CDK6Q00534 326 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 QPRTQ15274 297 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 ADRM1Q16186 407 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 MRPL2Q5T653 305 aaKnown RBP13.75□□□□□ -0.21
UBE3B-201ENST00000340074 PRAMEF8Q5VWM4 474 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 PRAMEF7Q5VXH5 474 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 NSUN5P2Q63ZY6 315 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 PLXDC2Q6UX71 529 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF836Q6ZNA1 936 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 LACC1Q8IV20 430 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 CCDC71Q8IV32 467 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-201ENST00000340074 MEIOBQ8N635 442 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 LRRC58Q96CX6 371 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 TMEM38AQ9H6F2 299 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 BCL2L10Q9HD36 194 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 EXOSC3Q9NQT5 275 aaKnown RBP13.75□□□□□ -0.21
UBE3B-201ENST00000340074 RLIMQ9NVW2 624 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 Q9UFV3 132 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 GPC6Q9Y625 555 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-201ENST00000340074 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 CD8B2A6NJW9 211 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 CLCA1A8K7I4 914 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 FXYD1O00168 92 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 ADAM11O75078 769 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 NPPAP01160 153 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 OPN1LWP04000 364 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 PGCP20142 388 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 IL11P20809 199 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 ADH6P28332 368 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 RYKP34925 604 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 SCARB2Q14108 478 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 LIN52Q52LA3 116 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 NANOGP8Q6NSW7 305 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 REEP3Q6NUK4 255 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 GGNQ86UU5 652 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 TREML1Q86YW5 311 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 METTL25Q8N6Q8 603 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 PCYOX1LQ8NBM8 494 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 TNIP2Q8NFZ5 429 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 RP9Q8TA86 221 aaKnown RBP13.74□□□□□ -0.21
UBE3B-201ENST00000340074 BBS10Q8TAM1 723 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 CA5BP1Q8WTZ4 195 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 MRGPRX4Q96LA9 322 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 TMEM185BQ9H7F4 350 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 KAT8Q9H7Z6 458 aaKnown RBP13.74□□□□□ -0.21
UBE3B-201ENST00000340074 NANOGQ9H9S0 305 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 DNAJB12Q9NXW2 375 aaKnown RBP13.74□□□□□ -0.21
UBE3B-201ENST00000340074 STOML1Q9UBI4 398 aa13.74□□□□□ -0.21
UBE3B-201ENST00000340074 PLEKHB1Q9UF11 243 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-201ENST00000340074 CDHR4A6H8M9 788 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 EFNA2O43921 213 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 NTN1O95631 604 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 THBS1P07996 1170 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 COX4I1P13073 169 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 SLC6A2P23975 617 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 EEFSECP57772 596 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 SESN3P58005 492 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 RAC1P63000 192 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 EEF1A1P68104 462 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 LARS2Q15031 903 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CYP51A1Q16850 503 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 SLC25A53Q5H9E4 307 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 RIPPLY2Q5TAB7 128 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CHMP1BQ7LBR1 199 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 PIGWQ7Z7B1 504 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 PTOV1Q86YD1 416 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 NAXEQ8NCW5 288 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 OR10A6Q8NH74 314 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF563Q8TA94 476 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 RCN3Q96D15 328 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CHST2Q9Y4C5 530 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 MBD3L4A6NDZ8 208 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 MBD3L3A6NE82 208 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 MBD3L5A6NJ08 208 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 EIF1AYO14602 144 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 AP3D1O14617 1153 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CLDN14O95500 239 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 IL2RAP01589 272 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 PABPC4LP0CB38 370 aaKnown RBP13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ETS2P15036 469 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ME2P23368 584 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 ELK4P28324 431 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CHRNB4P30926 498 aa13.73□□□□□ -0.21
UBE3B-201ENST00000340074 CEACAM8P31997 349 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms