RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RAET1EQ8TD07 263 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PHYHIPQ92561 330 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMPRSS11EQ9UL52 423 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM131LA2VDJ0 1609 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 C3P01024 1663 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 E5RGE8 158 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 HNRNPDLO14979 420 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM63AO94886 807 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 S100A3P33764 101 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 THBS4P35443 961 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TGFBR1P36897 503 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 POU3F4P49335 361 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 AQP4P55087 323 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 JOSD1Q15040 202 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GOLGA7BQ2TAP0 167 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 JAZF1Q86VZ6 243 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MEX3DQ86XN8 651 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GLB1L3Q8NCI6 653 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF512Q96ME7 567 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF582Q96NG8 517 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SPAG8Q99932 426 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 POLR2J2Q9GZM3 115 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MRPS33Q9Y291 106 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRAPPC4Q9Y296 219 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FREM1Q5H8C1 2179 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 H3BMH7 237 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GABRPO00591 440 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 COCHO43405 550 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GALTP07902 379 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FBLP22087 321 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GCAP28676 217 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 S100A11P31949 105 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZP2Q05996 745 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 AAK1Q2M2I8 961 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM83FQ8NEG4 500 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR1S2Q8NGQ3 325 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 NINJ1Q92982 152 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 OLAHQ9NV23 265 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF281Q9Y2X9 895 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FER1L6Q2WGJ9 1857 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PPP1R3GB7ZBB8 358 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 C17orf112F2Z3M2 114 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 NPHS1O60500 1241 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 JTBO76095 146 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PMP2P02689 132 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PSMB2P49721 201 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACTBL2Q562R1 376 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZCCHC9Q8N567 271 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM26EQ8N5C1 309 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GNPDA2Q8TDQ7 276 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM239Q8WW34 195 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 ULBP2Q9BZM5 246 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 GDF3Q9NR23 364 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 MYOTQ9UBF9 498 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCML2Q9UQR0 700 aa5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 PUS1Q9Y606 427 aaKnown RBP eCLIP5.74□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A1B0GTQ1 180 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GLOD5A6NK44 160 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR6C75A6NL08 312 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SIGLEC5O15389 551 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SMPD2O60906 423 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TSPAN13O95857 204 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 C1QBP02746 253 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LTFP02788 710 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 DGKEP52429 567 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PGGT1BP53609 377 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 RAP1BP61224 184 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACY1Q03154 408 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 APOFQ13790 326 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LEXMQ3ZCV2 418 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 KHDC1LQ5JSQ8 128 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRSS42Q7Z5A4 293 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NEIL3Q8TAT5 605 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASB9Q96DX5 294 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PLA2G12BQ9BX93 195 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CHRNA10Q9GZZ6 450 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TM7SF3Q9NS93 570 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 HCFC1R1Q9NWW0 138 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 HAO2Q9NYQ3 351 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENPP4Q9Y6X5 453 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SMAD7O15105 426 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LIPCP11150 499 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GCGRP47871 477 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TAS2R41P59536 307 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 BTG1P62324 171 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 RPL7AP62424 266 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CTBSQ01459 385 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRICKLE4Q2TBC4 344 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CHADLQ6NUI6 762 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ALX4Q9H161 411 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 UQCR10Q9UDW1 63 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 V9GY48 417 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NID2Q14112 1375 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLITRK3O94933 977 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 DYNLT1P63172 113 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 Q1RN00 199 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SGMS1Q86VZ5 419 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 FCRL3Q96P31 734 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR4C12Q96R67 309 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms