RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 K7EQS6 105 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 LANCL1O43813 399 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 TSC22D2O75157 780 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 COL9A1P20849 921 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 SHHQ15465 462 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 DEFB110Q30KQ9 67 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 MTFR2Q6P444 385 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 ARL14Q8N4G2 192 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 TEAD3Q99594 435 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 NDC1Q9BTX1 674 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 LMAN2LQ9H0V9 348 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 ACTR10Q9NZ32 417 aa13.02□□□□□ -0.33
ATP2C1-201ENST00000328560 TRAV6A0A075B6T7 132 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ANKRD34BA5PLL1 514 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 LINC01565O15544 149 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CDC123O75794 336 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 RCBTB2O95199 551 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 FZD5Q13467 585 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CEBPEQ15744 281 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 OAFQ86UD1 273 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 SAMD14Q8IZD0 417 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 FAM3CQ92520 227 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 WDR92Q96MX6 357 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ZFP3Q96NJ6 502 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 TNFRSF13CQ96RJ3 184 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 COQ7Q99807 217 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 TMEM27Q9HBJ8 222 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 POLHQ9Y253 713 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 PCDHGB7Q9Y5F8 929 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 REV3LO60673 3130 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 SGK494L7N484 410 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ORC5O43913 435 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 OR10H2O60403 315 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 MT-ND5P03915 603 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 EIF4EP06730 217 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CT62P0C5K7 136 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 NID1P14543 1247 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ACSL1P33121 698 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 KIR2DL1P43626 348 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ABHD13Q7L211 337 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CAMKVQ8NCB2 501 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 SARGQ9BW04 601 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 SLC22A7Q9Y694 548 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 A0A0B4J203 849 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 BHLHE40O14503 412 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 RFPL3O75679 317 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 NAA10P41227 235 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 MLLT3P42568 568 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 SRP9P49458 86 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 VSX2P58304 361 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 MRPL28Q13084 256 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 AMZ1Q400G9 498 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 TP53I3Q53FA7 332 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 FAM98AQ8NCA5 519 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CCDC3Q9BQI4 270 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ZNF350Q9GZX5 532 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 ABCG5Q9H222 651 aa13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 C19orf53Q9UNZ5 99 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-201ENST00000328560 CDHR4A6H8M9 788 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 TYRP1P17643 537 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.33
ATP2C1-201ENST00000328560 USP53Q70EK8 1073 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 OR4K13Q8NH42 304 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 BRIX1Q8TDN6 353 aaKnown RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 ARHGEF9O43307 516 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 AKR7A2O43488 359 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 EFR3AQ14156 821 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 SF3A2Q15428 464 aaKnown RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 SLC25A35Q3KQZ1 300 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 GXYLT1Q4G148 440 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 FCRL6Q6DN72 434 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 SLC44A3Q8N4M1 653 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 SMPDL3BQ92485 455 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 ZFYVE21Q9BQ24 234 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 THAP7Q9BT49 309 aaPredicted RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 MEPEQ9NQ76 525 aaPredicted RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 ING3Q9NXR8 418 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 KLF15Q9UIH9 416 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 USP34Q70CQ2 3546 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 CACNA1IQ9P0X4 2223 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 ALPK2Q86TB3 2170 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 OR2W5A6NFC9 320 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 LRRN3E7EW58 273 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 SLC19A2O60779 497 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 ARSBP15848 533 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 PPP1CAP62136 330 aa13□□□□□ -0.33
ATP2C1-201ENST00000328560 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
ATP2C1-201ENST00000328560 GPR135Q8IZ08 494 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms