RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 GATAD2BQ8WXI9 593 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 ADOQ96SZ5 270 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 DDX31Q9H8H2 851 aaKnown RBP10.66□□□□□ -0.7
COL4A5-201ENST00000328300 MBNL1Q9NR56 388 aaKnown RBP10.66□□□□□ -0.7
COL4A5-201ENST00000328300 STARD5Q9NSY2 213 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 GPR83Q9NYM4 423 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 ZNF69Q9UC07 566 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 KLF15Q9UIH9 416 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 TAF1LQ8IZX4 1826 aa10.66□□□□□ -0.7
COL4A5-201ENST00000328300 SYT7O43581 403 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ALOX12BO75342 701 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 CLIC3O95833 236 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 SOX2P48431 317 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 DNASE1L3Q13609 305 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 FRMPD2BQ6IN97 320 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 PHC2Q8IXK0 858 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 AKAP1Q92667 903 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ZNF583Q96ND8 569 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 BARD1Q99728 777 aaKnown RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 APOL3O95236 402 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ITGB2P05107 769 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 CKMT1AP12532 417 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 CAPZBP47756 277 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 EEF1A2Q05639 463 aaKnown RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 C1orf94Q6P1W5 598 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 WDR88Q6ZMY6 472 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 RFLNAQ6ZTI6 216 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 TPRA1Q86W33 373 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 PIGQQ9BRB3 760 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 HEMK1Q9Y5R4 338 aaPredicted RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 CD40LGP29965 261 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ENTPD1P49961 510 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 OR9Q2Q8NGE9 314 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 PDXPQ96GD0 296 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 WDR83Q9BRX9 315 aaKnown RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ATG5Q9H1Y0 275 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 PLEKHM1Q9Y4G2 1056 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 SCN4AP35499 1836 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 THBS1P07996 1170 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 ZNF35P13682 527 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 LIM2P55344 173 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 CAMK2DQ13557 499 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 MORN4Q8NDC4 146 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 SLC37A2Q8TED4 501 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 MS4A6EQ96DS6 147 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 MRGPRX1Q96LB2 322 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 OR6C1Q96RD1 312 aa10.65□□□□□ -0.7
COL4A5-201ENST00000328300 C19orf53Q9UNZ5 99 aaPredicted RBP10.65□□□□□ -0.7
COL4A5-201ENST00000328300 C12orf71A8MTZ7 269 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 ETV6P41212 452 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 AGBL4Q5VU57 503 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 SLC37A3Q8NCC5 494 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 OR1J2Q8NGS2 313 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 WDR20Q8TBZ3 569 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 ADAMTS19Q8TE59 1207 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 FN3KQ9H479 309 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 PCDHGA8Q9Y5G5 932 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 MYH10P35580 1976 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 LRIT2A6NDA9 550 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 GPR171O14626 319 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 MITFO75030 526 aaPredicted RBP10.65□□□□□ -0.71
COL4A5-201ENST00000328300 EIF2S3P41091 472 aaKnown RBP10.65□□□□□ -0.71
COL4A5-201ENST00000328300 SYPL1Q16563 259 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 MRPL2Q5T653 305 aaKnown RBP10.65□□□□□ -0.71
COL4A5-201ENST00000328300 OR1J4Q8NGS1 313 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.71
COL4A5-201ENST00000328300 EGLN2Q96KS0 407 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 FUNDC2Q9BWH2 189 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 NGBQ9NPG2 151 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 KCMF1Q9P0J7 381 aa10.65□□□□□ -0.71
COL4A5-201ENST00000328300 FAM227AF5H4B4 570 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ADAM23O75077 832 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 TP53P04637 393 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 MTHFD2P13995 350 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 HYAL1Q12794 435 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 OR7A5Q15622 319 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SPIN3Q5JUX0 258 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 TMEM205Q6UW68 189 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ABHD11Q8NFV4 315 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 OR5W2Q8NH69 310 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC38A5Q8WUX1 472 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 PHYHIPQ92561 330 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 VRK1Q99986 396 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ENKD1Q9H0I2 346 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 CNIH4Q9P003 139 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ACAD8Q9UKU7 415 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 METTL12A8MUP2 240 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 RAB3AP20336 220 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 FPR3P25089 353 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 MLLT11Q13015 90 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-201ENST00000328300 RSU1Q15404 277 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 NT5CQ8TCD5 201 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 FRS2Q8WU20 508 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 ELP4Q96EB1 424 aa10.64□□□□□ -0.71
COL4A5-201ENST00000328300 SLC6A20Q9NP91 592 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms