RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SSX9Q7RTT3 188 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 CDH20Q9HBT6 801 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 CLDN24A6NM45 220 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 CPT2P23786 658 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 ZC3H3Q8IXZ2 948 aaKnown RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 OR1E3Q8WZA6 343 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 QRSL1Q9H0R6 528 aaKnown RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 ZDHHC7Q9NXF8 308 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 SLC35A3Q9Y2D2 325 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 EMX1Q04741 257 aaPredicted RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 LTBQ06643 244 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 SLC10A1Q14973 349 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 Q6ZVL8 140 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 CLECL1Q8IZS7 167 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 UHRF2Q96PU4 802 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 EVA1AQ9H8M9 152 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 EHFQ9NZC4 300 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 GPR34Q9UPC5 381 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 SURF4O15260 269 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 MRPS34P82930 218 aaKnown RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 SPOCK1Q08629 439 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 SELPLGQ14242 412 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 PPP1R35Q8TAP8 253 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 TMEM82A0PJX8 343 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 LCATP04180 440 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF705AQ6ZN79 300 aaPredicted RBP15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 TSSK2Q96PF2 358 aa15.89■□□□□ 0.13
SMCHD1-201ENST00000320876 FZD7O75084 574 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 DDCP20711 480 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 SRPXP78539 464 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PLPP5Q8NEB5 264 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 ADAMTS16Q8TE57 1224 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 F5H5K5 113 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 BCKDHBP21953 392 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 NPBWR1P48145 328 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 GPR17Q13304 367 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 ATPAF1Q5TC12 328 aaPredicted RBP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 OR5L1Q8NGL2 311 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 GATA6Q92908 595 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 TMIGD2Q96BF3 282 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 COCHO43405 550 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 HAPLN1P10915 354 aaPredicted RBP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 ELK1P19419 428 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PRKCZQ05513 592 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 RBM24Q9BX46 236 aaKnown RBP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 IGSF5Q9NSI5 407 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 G3V2L1 256 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 TNFRSF10AO00220 468 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PRPH2P23942 346 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 HOXD13P35453 343 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 DCTP40126 519 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 IRF7Q92985 503 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PELI2Q9HAT8 420 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 IL37Q9NZH6 218 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 RIMS3Q9UJD0 308 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 CSNK1G3Q9Y6M4 447 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 B4GAT1O43505 415 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 CD163Q86VB7 1156 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 TMEM163Q8TC26 289 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 RAB39BQ96DA2 213 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PUS1Q9Y606 427 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 SLC22A7Q9Y694 548 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 A8MVM7 634 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 MAGEB4O15481 346 aaPredicted RBP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 FGF4P08620 206 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 ACP2P11117 423 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 OR9K2Q8NGE7 335 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 FN3KRPQ9HA64 309 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 TNFRSF1BP20333 461 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PAN3Q58A45 887 aaKnown RBP15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 PXT1Q8NFP0 134 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 CD99L2Q8TCZ2 262 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 RHBDD3Q9Y3P4 386 aa15.88■□□□□ 0.13
SMCHD1-201ENST00000320876 CACNG3O60359 315 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 HLA-DOBP13765 273 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 OR51L1Q8NGJ5 315 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 OR2A12Q8NGT7 310 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 RNF141Q8WVD5 230 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 LOC105369274A0A096LPK9 316 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 GKP32189 559 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 CXADRP78310 365 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 SLC14A1Q13336 389 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ZNF322Q6U7Q0 402 aaPredicted RBP15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 OR4N4Q8N0Y3 316 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 DIO2Q92813 273 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 EMC7Q9NPA0 242 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 NCDNQ9UBB6 729 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 FABP6P51161 128 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 ERVPABLB-1P60509 514 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 GRM2Q14416 872 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 NPY5RQ15761 445 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 BAGE3Q86Y29 109 aa15.87■□□□□ 0.13
SMCHD1-201ENST00000320876 BAGE2Q86Y30 109 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms