RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CCDC121Q6ZUS5 278 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 DEFB128Q7Z7B8 93 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC34Q8IZ02 419 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 C4orf33Q8N1A6 199 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 ATPAF2Q8N5M1 289 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 STKLD1Q8NE28 680 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 SUSD6Q92537 303 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 BTN2A3PQ96KV6 586 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 GPR137Q96N19 417 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 TGS1Q96RS0 853 aaKnown RBP3.48□□□□□ -1.85
SMCO3-201ENST00000316048 PITPNM3Q9BZ71 974 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 ZYG11BQ9C0D3 744 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 GBA3Q9H227 469 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC40Q9H9A6 602 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 NMUR1Q9HB89 426 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF319Q9P2F9 582 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 ELF5Q9UKW6 265 aaPredicted RBP3.48□□□□□ -1.85
SMCO3-201ENST00000316048 AP1M2Q9Y6Q5 423 aa3.48□□□□□ -1.85
SMCO3-201ENST00000316048 TSC2P49815 1807 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FAM159BA6NKW6 160 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SHISA7A6NL88 538 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 COPEO14579 308 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 LANCL1O43813 399 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TYROBPO43914 113 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PATE4P0C8F1 98 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SELEP16581 610 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PTPN4P29074 926 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ALDH3A1P30838 453 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RPA3P35244 121 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TIMP3P35625 211 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 GRIA1P42261 906 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 NDST2P52849 883 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CDH17Q12864 832 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RFTN1Q14699 578 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PSMD5Q16401 504 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 C3AR1Q16581 482 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PDK4Q16654 411 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 GPAT3Q53EU6 434 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FASTKD1Q53R41 847 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SDHAF4Q5VUM1 108 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RAET1GQ6H3X3 334 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SLC8B1Q6J4K2 584 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RGS9BPQ6ZS82 235 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 UMODL1-AS1Q8N2C9 162 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 NPWQ8N729 165 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 BANPQ8N9N5 519 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 OR56B1Q8NGI3 324 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF461Q8TAF7 563 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 N4BP2L2Q92802 583 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CELF6Q96J87 481 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 B3GALT6Q96L58 329 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SPAG8Q99932 426 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 IL22Q9GZX6 179 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 NACA2Q9H009 215 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FNDC4Q9H6D8 234 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 MARCH5Q9NX47 278 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 MRTO4Q9UKD2 239 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 VANGL2Q9ULK5 521 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ERVK-19Q9WJR5 959 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SNX10Q9Y5X0 201 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CCT8L1PA6NM43 557 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TRIM49D1C9J1S8 452 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 GOLGA8RI6L899 631 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 GRID2O43424 1007 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CACNG3O60359 315 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 KRT33AO76009 404 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CLDN1O95832 211 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 HEXBP07686 556 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PRSS56P0CW18 603 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TAC1P20366 129 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SPRP35270 261 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 PGFP49763 221 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FUT7Q11130 342 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 EFTUD2Q15029 972 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FAM106AQ4KMX7 169 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 MS4A13Q5J8X5 152 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FGD3Q5JSP0 725 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 MARC1Q5VT66 337 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TPGS2Q68CL5 300 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TCEAL6Q6IPX3 200 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 CAPN13Q6MZZ7 669 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 C6orf89Q6UWU4 347 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 MEX3BQ6ZN04 569 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TIFABQ6ZNK6 161 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 Q6ZSR9 355 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM135Q86UB9 458 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 APLFQ8IW19 511 aaPredicted RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 BBS5Q8N3I7 341 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 LEMD2Q8NC56 503 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 IPMKQ8NFU5 416 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 OR52K1Q8NGK4 314 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TCP10LQ8TDR4 215 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ACMSDQ8TDX5 336 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 SELENOMQ8WWX9 145 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TOP1MTQ969P6 601 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RAB39BQ96DA2 213 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 NODALQ96S42 347 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms