RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NT5CQ8TCD5 201 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 TSLPQ969D9 159 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 MSLNLQ96KJ4 702 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 ASPDHA6ND91 283 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 SULT2B1O00204 365 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 C4BPBP20851 252 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 E2F1Q01094 437 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 OR7A5Q15622 319 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 AMER3Q8N944 861 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 SLCO4A1Q96BD0 722 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
DDX54-202ENST00000314045 OR2W5A6NFC9 320 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SPINT1O43278 529 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 KIAA0513O60268 411 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NID1P14543 1247 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 ACTA2P62736 377 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ACTG2P63267 376 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 RAE1P78406 368 aaKnown RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 MOGQ16653 247 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 PRAMEF20Q5VT98 475 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 LINGO2Q7L985 606 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 KMT5CQ86Y97 462 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NIPSNAP1Q9BPW8 284 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ARHGAP9Q9BRR9 750 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SIDT1Q9NXL6 827 aaKnown RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 LGI1O95970 557 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SOD1P00441 154 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 GYPBP06028 91 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 BCKDHBP21953 392 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 TACR3P29371 465 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 PSMD7P51665 324 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 BICRALQ6AI39 1079 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SLC7A13Q8TCU3 470 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 MMP27Q9H306 513 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ASB4Q9Y574 426 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 TNFRSF21O75509 655 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 HTR3AP46098 478 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 EPHA4P54764 986 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NCS1P62166 190 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 HSF2Q03933 536 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SRYQ05066 204 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 THRSPQ92748 146 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NUDT22Q9BRQ3 303 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 B3GNT4Q9C0J1 378 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 RBM7Q9Y580 266 aaKnown RBP12.69□□□□□ -0.38
DDX54-202ENST00000314045 ACOT7O00154 380 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ILKQ13418 452 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 TUBA3EQ6PEY2 450 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 SYT14Q8NB59 555 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 UPB1Q9UBR1 384 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
DDX54-202ENST00000314045 GADD45AP24522 165 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 WNT4P56705 351 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 AP3S2P59780 193 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
DDX54-202ENST00000314045 MBOAT2Q6ZWT7 520 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 GDF7Q7Z4P5 450 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 C1orf210Q8IVY1 113 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 INIPQ9NRY2 104 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 SCN5AQ14524 2016 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 GJE1A6NN92 205 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 MRPS14O60783 128 aaKnown RBP12.68□□□□□ -0.38
DDX54-202ENST00000314045 PRAMEF4O60810 478 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 EML2O95834 649 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 IGHEP01854 428 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 CHRM4P08173 479 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 ENTPD1P49961 510 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 CARTPTQ16568 116 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 PRAMEF9Q5VWM5 478 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 VN1R4Q7Z5H5 301 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 CAMKMTQ7Z624 323 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 B3GNT8Q7Z7M8 397 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 PNLDC1Q8NA58 520 aaKnown RBP12.68□□□□□ -0.38
DDX54-202ENST00000314045 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 TNFRSF13CQ96RJ3 184 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 GPN2Q9H9Y4 310 aaPredicted RBP12.68□□□□□ -0.38
DDX54-202ENST00000314045 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 KRBA1A5PL33 1030 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 DSCR3O14972 297 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 TFPTP0C1Z6 253 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 WNT3P56703 355 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 PLP2Q04941 152 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 C17orf67Q0P5P2 114 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 CHAF1BQ13112 559 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 SLC14A1Q13336 389 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 HSD17B12Q53GQ0 312 aa12.68□□□□□ -0.38
DDX54-202ENST00000314045 RAB11FIP2Q7L804 512 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms