RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 DGCR6LQ9BY27 220 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 POLR2J2Q9GZM3 115 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 POLR2J3Q9H1A7 115 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ANKRD19PQ9H560 264 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 EVA1AQ9H8M9 152 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 ZBTB20Q9HC78 741 aaPredicted RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 PAPOLBQ9NRJ5 636 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 MYOTQ9UBF9 498 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 SLC35A3Q9Y2D2 325 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 POFUT2Q9Y2G5 429 aa6.38□□□□□ -1.39
PTCD2-201ENST00000308077 MRPS18BQ9Y676 258 aaKnown RBP6.38□□□□□ -1.39
PTCD2-201ENST00000308077 A0A0B4J2E0 115 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 A0A1B0GX12 115 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 A0A1W2PQD3 144 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OR6C70A6NIJ9 312 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 BCKDKO14874 412 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 FADS1O60427 444 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 MAN1A2O60476 641 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OR2J2O76002 312 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ADAP00813 363 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 IGHEP01854 428 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NGFRP08138 427 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 UBL4AP11441 157 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 HPGDP15428 266 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OTX2P32243 289 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 RYKP34925 604 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 DLSTP36957 453 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NRG3P56975 720 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 FBXW4P57775 412 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PSPHP78330 225 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF117Q03924 483 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 Q0VFX4 171 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 RAPSNQ13702 412 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 SSPNQ14714 243 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 EXT1Q16394 746 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZSWIM7Q19AV6 140 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF691Q5VV52 312 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 TTC23Q5W5X9 447 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PLAG1Q6DJT9 500 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 C1orf94Q6P1W5 598 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NDUFAF7Q7L592 441 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF550Q7Z398 422 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PRICKLE2Q7Z3G6 844 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 MARCH3Q86UD3 253 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 APLFQ8IW19 511 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OR5L2Q8NGL0 311 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 M1APQ8TC57 530 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 GRHL3Q8TE85 626 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 HGDQ93099 445 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 SLC38A4Q969I6 547 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NODALQ96S42 347 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PITX2Q99697 317 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 DEFB126Q9BYW3 111 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 B3GNT4Q9C0J1 378 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 POLR1BQ9H9Y6 1135 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF160Q9HCG1 818 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 MMP25Q9NPA2 562 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 MGAT4BQ9UQ53 548 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 CARD8Q9Y2G2 431 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PCNX3Q9H6A9 2034 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 CPAMD8Q8IZJ3 1885 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 NSG1A0A0A6YYJ2 146 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 MAGEA13PA6NCF6 341 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 CDRT15L2A8MXV6 281 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 B4DXG7 233 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 C21orf140B9A014 251 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 STMND1H3BQB6 276 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 SMNDC1O75940 238 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 IGFBP1P08833 259 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 CDH2P19022 906 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 EVI2BP34910 448 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OMPP47874 163 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 UGT2B15P54855 530 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 RPS15P62841 145 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 RPP38P78345 283 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 KEAP1Q14145 624 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 CTU2Q2VPK5 515 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 FOXB2Q5VYV0 432 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 LAIR2Q6ISS4 152 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 KRT80Q6KB66 452 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF613Q6PF04 617 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF730Q6ZMV8 503 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PARP8Q8N3A8 854 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 LSMEM1Q8N8F7 131 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 OR5M3Q8NGP4 307 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PFN4Q8NHR9 129 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ACOT11Q8WXI4 607 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 RASL10BQ96S79 203 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 UCK2Q9BZX2 261 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF556Q9HAH1 456 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM27Q9HBJ8 222 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 EXOSC3Q9NQT5 275 aaKnown RBP6.37□□□□□ -1.39
PTCD2-201ENST00000308077 PNPLA3Q9NST1 481 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 FBXL4Q9UKA2 621 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms