RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PDE7AQ13946 482 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 TMEM236Q5W0B7 351 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 VASNQ6EMK4 673 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 ENDOVQ8N8Q3 282 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 RAB2BQ8WUD1 216 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 FCAMRQ8WWV6 532 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 TRIM63Q969Q1 353 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 SYT11Q9BT88 431 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 PAPOLGQ9BWT3 736 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 HCRTR1O43613 425 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 CTNSO60931 367 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 C8BP07358 591 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 CDK4P11802 303 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 HTR5AP47898 357 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 LIM2P55344 173 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 SEMA3BQ13214 749 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 SQSTM1Q13501 440 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 OR9Q2Q8NGE9 314 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF845Q96IR2 970 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 GSKIPQ9P0R6 139 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 ENPP4Q9Y6X5 453 aa9.99□□□□□ -0.81
SYNPO2-201ENST00000307142 OR7A17O14581 309 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 RGS9O75916 674 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 STK17BO94768 372 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 IVDP26440 423 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NKX3-2P78367 333 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 MARCH3Q86UD3 253 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 OR51T1Q8NGJ9 327 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 GOT1L1Q8NHS2 421 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF675Q8TD23 568 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 BORCS5Q969J3 196 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF566Q969W8 418 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZMYND19Q96E35 227 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 LRFN1Q9P244 771 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 B4GALT3O60512 393 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 KCNAB2Q13303 367 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 STX12Q86Y82 276 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 KLHL15Q96M94 604 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 TSPAN10Q9H1Z9 355 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 SH2B3Q9UQQ2 575 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 CMAHPQ9Y471 501 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF175Q9Y473 711 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 SMCO3A2RU48 225 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 HBA1P69905 142 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 KCTD11Q693B1 232 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 OR1J2Q8NGS2 313 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 BPIFA2Q96DR5 249 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC6A5Q9Y345 797 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 MYO16Q9Y6X6 1858 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 TARM1B6A8C7 271 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 LMO7DNF2Z398 122 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 TBX10O75333 385 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC10A1Q14973 349 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF750Q32MQ0 723 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 SLCO4C1Q6ZQN7 724 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 YRDCQ86U90 279 aaKnown RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF584Q8IVC4 421 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NAXDQ8IW45 347 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PPP1R35Q8TAP8 253 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PIGCQ92535 297 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 MS4A8Q9BY19 250 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 DCSTAMPQ9H295 470 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NOP16Q9Y3C1 178 aaKnown RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ANXA3P12429 323 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 RGS6P49758 472 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PAGE3Q5JUK9 113 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PYHIN1Q6K0P9 492 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 OR11L1Q8NGX0 322 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NEIL3Q8TAT5 605 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 FEVQ99581 238 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NRSN2Q9GZP1 204 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 OR51B4Q9Y5P0 310 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ARID1BQ8NFD5 2236 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PLOD2O00469 737 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 NRG2O14511 850 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ORC5O43913 435 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 DIRAS3O95661 229 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 CLIC3O95833 236 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 GFERP55789 205 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 ACBD7Q8N6N7 88 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 PAPD5Q8NDF8 572 aaKnown RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 OR2I1PQ8NGU4 316 aa9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 KLF13Q9Y2Y9 288 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-201ENST00000307142 IDSB3KWA1 339 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 PPP6CO00743 305 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 LSM1O15116 133 aaKnown RBP9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC22A1O15245 554 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 ZDHHC11BP0C7U3 371 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 LHCGRP22888 699 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MAGEA6P43360 314 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 KCNJ10P78508 379 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MICAQ29983 383 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 LAIR1Q6GTX8 287 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 SPERTQ8NA61 448 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 MYEOVQ96EZ4 313 aa9.97□□□□□ -0.81
SYNPO2-201ENST00000307142 ATOH8Q96SQ7 321 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms