RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 TANKQ92844 425 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 GPR34Q9UPC5 381 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 BDKRB2P30411 391 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 SORDQ00796 357 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 PEA15Q15121 130 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 SLX4IPQ5VYV7 408 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 RASGRP3Q8IV61 690 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 CCDC71LQ8N9Z2 235 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 OR52I1Q8NGK6 324 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
COL3A1-201ENST00000304636 INTS14Q96SY0 518 aa12.05□□□□□ -0.48
COL3A1-201ENST00000304636 A0A1B0GV50 99 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 MEIS3P1A6NDR6 274 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 KNG1P01042 644 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 C1QBP02746 253 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PROS1P07225 676 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ASAH1Q13510 395 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 GRM7Q14831 915 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 NXNL2Q5VZ03 156 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF322Q6U7Q0 402 aaPredicted RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF566Q969W8 418 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZFYVE21Q9BQ24 234 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 TMEM38AQ9H6F2 299 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 MCCC2Q9HCC0 563 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PPP4R1LQ9P1A2 415 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ADAM29Q9UKF5 820 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 VSTM2BA6NLU5 285 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 TP53I11O14683 189 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 GYPBP06028 91 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PIPP12273 146 aaPredicted RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CCNOP22674 350 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ETV6P41212 452 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CTSCP53634 463 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CXADRP78310 365 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PDE7AQ13946 482 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 MFSD13AQ14CX5 517 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CARD17Q5XLA6 110 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 TRAV27A0A087WT01 109 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF888P0CJ79 500 aaPredicted RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 OR1Q1Q15612 314 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CD276Q5ZPR3 534 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PGAP1Q75T13 922 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 A0A1B0GTW7 788 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 AGPAT2O15120 278 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 SNRPBP14678 240 aaKnown RBP12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ELOCQ15369 112 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 CLVS2Q5SYC1 327 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 ALKBH4Q9NXW9 302 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
COL3A1-201ENST00000304636 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CR2P20023 1033 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 RAB3AP20336 220 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SLC6A8P48029 635 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 RSU1Q15404 277 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 GDPD3Q7L5L3 318 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 MYEF2Q9P2K5 600 aaKnown RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF337Q9Y3M9 751 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 C5AR1P21730 350 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ARNTP27540 789 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CHATP28329 748 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 GPR157Q5UAW9 335 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 OLIG1Q8TAK6 271 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 NRIP3Q9NQ35 241 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 SEMA4GQ9NTN9 838 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 FAM86C1Q9NVL1 165 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CYP8B1Q9UNU6 501 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 ICKQ9UPZ9 632 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 TCRBV5S2A0A599 114 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 MYADML2A6NDP7 307 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 GFRA2O00451 464 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 HLA-AP01891 365 aaKnown RBP12.03□□□□□ -0.48
COL3A1-201ENST00000304636 FURINP09958 794 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 UBL4AP11441 157 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 OPRD1P41143 372 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 CST6Q15828 149 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 COMTD1Q86VU5 262 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 LKAAEAR1Q8TD35 194 aa12.03□□□□□ -0.48
COL3A1-201ENST00000304636 PEX11GQ96HA9 241 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms