RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ABHD11Q8NFV4 315 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ATOH1Q92858 354 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 FAM71F1Q96KD3 344 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 COL4A1P02462 1669 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 AMY2BP19961 511 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 GDF1P27539 372 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 PPP5CP53041 499 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 SNU13P55769 128 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 EEF1A1P68104 462 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CSNK2A1P68400 391 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ECH1Q13011 328 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 SMAD2Q15796 467 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 FAM205BPQ63HN1 556 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF704Q6ZNC4 412 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CHDHQ8NE62 594 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 HAVCR2Q8TDQ0 301 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF431Q8TF32 576 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 SPTSSAQ969W0 71 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 NEURL3Q96EH8 262 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 LMF1Q96S06 567 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CCNL2Q96S94 520 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 MKRN2Q9H000 416 aaKnown RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 PARPBPQ9NWS1 579 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 DCDC2BA2VCK2 349 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 PLPP1O14494 284 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ALPLP05186 524 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 BMP1P13497 986 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 SLC5A2P31639 672 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 CSNK1A1P48729 337 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 TSPAN31Q12999 210 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 DCAF12Q5T6F0 453 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 GARNL3Q5VVW2 1013 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 NKAIN2Q5VXU1 208 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 GPR139Q6DWJ6 353 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 ARL14Q8N4G2 192 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 OR5W2Q8NH69 310 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 DUSP19Q8WTR2 217 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 OR10A5Q9H207 317 aa10.53□□□□□ -0.72
USP6NL-201ENST00000277575 TP63Q9H3D4 680 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-201ENST00000277575 OR5K3A6NET4 321 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 CTNSO60931 367 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 SLC35E2P0CK97 266 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 ITGAMP11215 1152 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 GPX2P18283 190 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 IDUAP35475 653 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 TSFMP43897 325 aaKnown RBP10.52□□□□□ -0.72
USP6NL-201ENST00000277575 LSAMPQ13449 338 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 NTRK2Q16620 822 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 HES5Q5TA89 166 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 FAM71E1Q6IPT2 247 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 PYHIN1Q6K0P9 492 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 LAS2Q8IYD9 372 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 PELI3Q8N2H9 469 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 NANOS1Q8WY41 292 aaKnown RBP10.52□□□□□ -0.72
USP6NL-201ENST00000277575 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.72
USP6NL-201ENST00000277575 OR10A4Q9H209 315 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.72
USP6NL-201ENST00000277575 CDH20Q9HBT6 801 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 ZNF160Q9HCG1 818 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 CNOT2Q9NZN8 540 aaKnown RBP10.52□□□□□ -0.72
USP6NL-201ENST00000277575 PCDH10Q9P2E7 1040 aa10.52□□□□□ -0.72
USP6NL-201ENST00000277575 TRBV4-1A0A0J9YWV2 114 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 I6L893 689 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 CDK1P06493 297 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 DCNP07585 359 aaKnown RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ICAM2P13598 275 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 CHMP24386 653 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 POU3F1Q03052 451 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 C14orf28Q4W4Y0 310 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 TMEM64Q6YI46 380 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 Q6ZPB1 254 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 MMP21Q8N119 569 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 MRGPRX1Q96LB2 322 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ZNF700Q9H0M5 742 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 FN3KQ9H479 309 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 TRAV18A0A075B6X5 111 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 YY2O15391 372 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 CFL1P23528 166 aaKnown RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 GNRHRP30968 328 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 PHC1P78364 1004 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ZNF91Q05481 1191 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 SMN1Q16637 294 aaKnown RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 XKR7Q5GH72 579 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 PATE1Q8WXA2 126 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ELP4Q96EB1 424 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 OR51E2Q9H255 320 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ZNF850A8MQ14 1090 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 A8MV72 311 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 F13BP05160 661 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 S100A6P06703 90 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 POU3F2P20265 443 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-201ENST00000277575 LCN1P31025 176 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 PSMB10P40306 273 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 CDK10Q15131 360 aa10.52□□□□□ -0.73
USP6NL-201ENST00000277575 ZNF750Q32MQ0 723 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms