RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SLC22A31A6NKX4 558 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CDX4O14627 284 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 RCBTB2O95199 551 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CSF2P04141 144 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 DBIP07108 87 aaKnown RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 HOXC4P09017 264 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 SLC35G6P0C7Q6 338 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 SMIM10L1P0DMW3 83 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 BMP7P18075 431 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF10P21506 573 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 RPS4Y1P22090 263 aaKnown RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 PTGER1P34995 402 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 INPP1P49441 399 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CAV3P56539 151 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 C1QTNF12Q5T7M4 302 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 PEAR1Q5VY43 1037 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 NIPAL3Q6P499 406 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF836Q6ZNA1 936 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 VN1R4Q7Z5H5 301 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 LRRC28Q86X40 367 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 KLBQ86Z14 1044 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CREB3L1Q96BA8 519 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 SMIM10Q96HG1 83 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 DMRTB1Q96MA1 342 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 TTYH2Q9BSA4 534 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 SLC17A9Q9BYT1 436 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 RNF32Q9H0A6 362 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 MARCH7Q9H992 704 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF223Q9UK11 482 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-201ENST00000277198 GPSM3Q9Y4H4 160 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 CSNK1G3Q9Y6M4 447 aa11.97□□□□□ -0.49
C9orf3-201ENST00000277198 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 C4orf47A7E2U8 309 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 METTL12A8MUP2 240 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 BHLHE40O14503 412 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 CDC42EP2O14613 210 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SOX30O94993 753 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SEMA4FO95754 770 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 AK1P00568 194 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 STATHP02808 62 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 PSKH1P11801 424 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF24P17028 368 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SSTR4P31391 388 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF136P52737 540 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 BTG1P62324 171 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 FAPQ12884 760 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 GALEQ14376 348 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 LTB4RQ15722 352 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 CACNA1EQ15878 2313 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF791Q3KP31 576 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 EXOSC6Q5RKV6 272 aaKnown RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 FAM111BQ6SJ93 734 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SMARCD3Q6STE5 483 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF438Q7Z4V0 828 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 CDK20Q8IZL9 346 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 OR5M3Q8NGP4 307 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 ZFAND1Q8TCF1 268 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 UBASH3BQ8TF42 649 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 CDS1Q92903 461 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 TM4SF19Q96DZ7 209 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SENP5Q96HI0 755 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 HS6ST2Q96MM7 605 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 FYTTD1Q96QD9 318 aaKnown RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SDF2Q99470 211 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 PRSS27Q9BQR3 290 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 APOOQ9BUR5 198 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 OR52D1Q9H346 318 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 DUSP22Q9NRW4 184 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 CYSLTR2Q9NS75 346 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 SIDT1Q9NXL6 827 aaKnown RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 KCMF1Q9P0J7 381 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 C19orf53Q9UNZ5 99 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-201ENST00000277198 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 NOX1Q9Y5S8 564 aa11.96□□□□□ -0.49
C9orf3-201ENST00000277198 A0A087WV62 115 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 SHISA3A0PJX4 238 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 C12orf71A8MTZ7 269 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 A8MV72 311 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-201ENST00000277198 LRRTM2O43300 516 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 LATO43561 262 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 PLRG1O43660 514 aaKnown RBP11.96□□□□□ -0.5
C9orf3-201ENST00000277198 PLPP2O43688 288 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 STX11O75558 287 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 C1QBP02746 253 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 TALDO1P37837 337 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 RFX3P48380 749 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 GZMKP49863 264 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 HOXC5Q00444 222 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 TNK1Q13470 666 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 P2RY14Q15391 338 aa11.96□□□□□ -0.5
C9orf3-201ENST00000277198 C6orf183Q5T699 404 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms