RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SERPINA11Q86U17 422 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 FIBINQ8TAL6 211 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 BPIFA2Q96DR5 249 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 PRRC1Q96M27 445 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 A0A0A6YYC8 382 aaPredicted RBP16.89■□□□□ 0.29
COL5A3-201ENST00000264828 I3L1I5 382 aaPredicted RBP16.89■□□□□ 0.29
COL5A3-201ENST00000264828 PLCXD3Q63HM9 321 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 APOOLQ6UXV4 268 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 C12orf45Q8N5I9 185 aaPredicted RBP16.89■□□□□ 0.29
COL5A3-201ENST00000264828 GGHQ92820 318 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 GATA6Q92908 595 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 LPAR4Q99677 370 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
COL5A3-201ENST00000264828 ANTXRLA6NF34 631 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 MROH6A6NGR9 719 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 HMGN2P05204 90 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 DHRS4L1P0CG22 281 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 RPS5P46782 204 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ABHD12BQ7Z5M8 362 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 OR1J4Q8NGS1 313 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 GTF2H4Q92759 462 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 CCNL2Q96S94 520 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 NAA50Q9GZZ1 169 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SEMA4FO95754 770 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 NTSR1P30989 418 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 TNFSF8P32971 234 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SORDQ00796 357 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 GDPGP1Q6ZNW5 385 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ZNF597Q96LX8 424 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 A6NIZ1 184 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 MED6O75586 246 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 TGM4P49221 684 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 RAP1BP61224 184 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 RAP1AP62834 184 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SLC9A3R2Q15599 337 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 PM20D1Q6GTS8 502 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SULF2Q8IWU5 870 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 GPR26Q8NDV2 337 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ACTR10Q9NZ32 417 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ZNF443Q9Y2A4 671 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 MRPS14O60783 128 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 GJB3O75712 270 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 M6PRP20645 277 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 VEGFBP49765 207 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 CXADRP78310 365 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 NTHL1P78549 312 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 GLO1Q04760 184 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 DNAJC22Q8N4W6 341 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 OR8J2Q8NGG1 315 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 TMEM163Q8TC26 289 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 PCNPQ8WW12 178 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 FOXRED1Q96CU9 486 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 LRRC46Q96FV0 321 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 PRRT1Q99946 306 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ZNF334Q9HCZ1 680 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 APEHP13798 732 aaKnown RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 CASP6P55212 293 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 SELPLGQ14242 412 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 HSD11B1LQ7Z5J1 315 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 MYADMQ96S97 322 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 ZNF587Q96SQ5 575 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-201ENST00000264828 EGLN3Q9H6Z9 239 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 PLEK2Q9NYT0 353 aa16.88■□□□□ 0.29
COL5A3-201ENST00000264828 PROS1P07225 676 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 RPL23AP62750 156 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 VEZF1Q14119 521 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 TBC1D20Q96BZ9 403 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 TXNDC15Q96J42 360 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 SAMD10Q9BYL1 202 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 H3BUI4 141 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 GPR39O43194 453 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 STK17BO94768 372 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 LTBQ06643 244 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 SLC14A1Q13336 389 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 TATDN3Q17R31 274 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 Q6ZPB1 254 aaPredicted RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 C1QTNF2Q9BXJ5 285 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 TXNL4BQ9NX01 149 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 HLA-AP01891 365 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 MSR1P21757 451 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 RABIFP47224 123 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 CLDN6P56747 220 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 BTN1A1Q13410 526 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 PEA15Q15121 130 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 TCTE1Q5JU00 501 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 EXOSC6Q5RKV6 272 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 MEPCEQ7L2J0 689 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 LRRTM3Q86VH5 581 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 C22orf15Q8WYQ4 148 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 FOXJ1Q92949 421 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 LINC00597Q9H2U6 94 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 OR52D1Q9H346 318 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 EMCNQ9ULC0 261 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
COL5A3-201ENST00000264828 STK11Q15831 433 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 UBE2NLQ5JXB2 153 aa16.87■□□□□ 0.29
COL5A3-201ENST00000264828 OR5D14Q8NGL3 314 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms