RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ITGB7P26010 798 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ETV6P41212 452 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 TAS2R19P59542 299 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ZNF585AQ6P3V2 769 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 RANBP10Q6VN20 620 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 OR14L1PQ8NHC6 308 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 CDH20Q9HBT6 801 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 USP36Q9P275 1121 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 TSPAN11A1L157 253 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 MEIOCA2RUB1 952 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ATP6V1G2-DDX39BF2Z307 99 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 DVL2O14641 736 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ALDOBP05062 364 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 GABRA5P31644 462 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 IGFN1Q86VF2 1251 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ZFP82Q8N141 532 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ASB17Q8WXJ9 295 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 CD300AQ9UGN4 299 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ENTPD2Q9Y5L3 495 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 RREB1Q92766 1687 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 HTR3BO95264 441 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC22A6Q4U2R8 563 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC6A19Q695T7 634 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 UPRTQ96BW1 309 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 TRMT2BQ96GJ1 504 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 USB1Q9BQ65 265 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ANKMY1Q9P2S6 941 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 TEX51A0A1B0GUA7 166 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 SF3B4Q15427 424 aaKnown RBP eCLIP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 PPP1R35Q8TAP8 253 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 BOCQ9BWV1 1114 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 MMP28Q9H239 520 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 F5H5K5 113 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 KIR2DS3Q14952 304 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 OR4N5Q8IXE1 308 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 SORT1Q99523 831 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 MFFQ9GZY8 342 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 NT5DC2Q9H857 520 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 TESQ9UGI8 421 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 OR2T1O43869 369 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 BRIX1Q8TDN6 353 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 ZMYND19Q96E35 227 aaPredicted RBP16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 V9GY05 133 aa16.43■□□□□ 0.22
NOTCH3-201ENST00000263388 PDCD11Q14690 1871 aaKnown RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 FANCGO15287 622 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SEMA4FO95754 770 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 DHRS4L1P0CG22 281 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 INHBCP55103 352 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 IDO2Q6ZQW0 420 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC19A3Q9BZV2 496 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SERTAD4Q9NUC0 356 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 MLLT11Q13015 90 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 IRF4Q15306 451 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CCNJQ5T5M9 372 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CMIPQ8IY22 773 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 IL26Q9NPH9 171 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 MYEF2Q9P2K5 600 aaKnown RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CPNE6O95741 557 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 HLA-AP01891 365 aaKnown RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 PKLRP30613 574 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CD68P34810 354 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 DLX5P56178 289 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 RBM39Q14498 530 aaKnown RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 TCEAL2Q9H3H9 227 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SLC22A7Q9Y694 548 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 OR7A17O14581 309 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ZFAND1Q8TCF1 268 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 MITFO75030 526 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 PITX1P78337 314 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ABHD17BQ5VST6 288 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 METAP1DQ6UB28 335 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 TPRA1Q86W33 373 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ZBED3Q96IU2 234 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 DOCK1Q14185 1865 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 IL1AP01583 271 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 OTX2P32243 289 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 MS4A2Q01362 244 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 RELAQ04206 551 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 TATDN3Q17R31 274 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CBARPQ8N350 705 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ADAMTS16Q8TE57 1224 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 ACPTQ9BZG2 426 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SPATA6Q9NWH7 488 aaPredicted RBP16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 MPIG6BO95866 241 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 SSTR4P31391 388 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 HSD17B7P56937 341 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CENPOQ9BU64 300 aa16.42■□□□□ 0.22
NOTCH3-201ENST00000263388 CHD5Q8TDI0 1954 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 SFTPDP35247 375 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 GPR176Q14439 515 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 PAGE3Q5JUK9 113 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 STEAP2Q8NFT2 490 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 OR6F1Q8NGZ6 308 aa16.41■□□□□ 0.22
NOTCH3-201ENST00000263388 C5AR2Q9P296 337 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms